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Detailed information on CNT30376197


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SUI4|PSAL_ARATH, E-value = 2e-52

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30129085Arabidopsis thalianaCorymbia citriodora20.197.8884.3483forward

Expression of CNT30376197

Peptides detected in this lncRNA

>peptide 1 (67 aa)
PSHPRDPSKEESSSELSPSISRLKLVRLLLPPSQSQTRCDRWLSFLERRDTVDGEAHAEDDYQPSRG*

>peptide 2 (36 aa)
MGQAHFHTAEERLLLSWLAIGDALAAIVLFVLVVLL*

Sequence

>CNT30376197
GCCCAAGTCACCCCAGAGATCCCTCCAAAGAAGAATCCTCCAGTGAACTTAGCCCATCCATCAGCCGTTTGAAGCTGGTCAGGCTGCTTCTTCCGCCCAG
TCAAAGTCAAACTCGGTGCGATCGATGGCTCTCCTTCCTTGAAAGAAGAGATACCGTAGATGGTGAGGCACATGCTGAGGATGACTACCAGCCCAGCCGC
GGCTAAAGACCCGGCTGACCCGGCGTAAGCAGTGTTCCTTAATGGGCCAGCTTTGACGAATGGGCCCACTAAGAAGAAACCATGGGCCAGGCCCACTTCC
ACACCGCGGAGGAGAGGCTGCTCCTTAGCTGGCTCGCCATTGGAGATGCACTCGCTGCCATTGTTCTTTTTGTCTTGGTTGTTCTCTTATGAAAATTAAA
ATAAAATCGAG