CANTATAdb - search

Detailed information on CNT3037521

BLAST search results

BLAST vs Swiss-Prot:
sp|P09755|CB22_SOYBN, E-value = 1e-10

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30478064	Cucumis melo	Arabidopsis halleri	12.6	25.32	83.75	80	forward

Expression of CNT3037521

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MENREDALTATPEMGTAAANLDLEEERTEGKAVVAMPQLIKVLEAIEEKERRD*

Sequence

>CNT3037521
TCTCTAATTGATATGAAAGAAATGAGAGCAATTACCGTTTTTGATCTCTTTCACTTTGTATTCCTTCAACTTTTCAGGATCTTTTGAGTAGCCTAATGGG
TCAAAAGCACCTCCAGGGAACTCAATGACCAAAATGGTGGGCAAAGTTCCCCATGGAACTGGTTGTCCCAAGTATGTAGCTTGGCCTCCTGGAACTGCTG
CCCATTCTTGAGCTTTCACCCAGTTGCCCAATCCCAAAGCCTCAGGTACCAAAATCCCTGGCTAAAAAACAAAAGGAACAGCATTGGAAAATGAAATAGG
AAAAGCCCCCATCAATCTCAGAATCAAGCAACTGAATTTGGTAAGCTTACAACAGCAAGCATGGCCCATCTGCAGTGAATTAGCTCAGACTCCTTGAATC
TCTCGAGGTAGGGGGGACGGGGCTGGCCAGGCATCCACTCAGAGGACATGGAAAATCGGGAAGATGCATTGACAGCGACACCGGAAATGGGGACAGCGGC
TGCGAATTTAGACTTAGAAGAAGAAAGGACTGAAGGGAAAGCGGTGGTGGCAATGCCACAGCTCATCAAGGTGTTGGAAGCCATTGAAGAAAAAGAGAGA
AGAGATTGAGAGAGAGAGTGAGAGAGTGTGAGAAT