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Detailed information on CNT3037519

BLAST search results

BLAST vs Swiss-Prot:
sp|Q39654|PSAL_CUCSA, E-value = 2e-56

BLAST vs NONCODE:
NONMTRT001761, E-value = 1e-36

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30672989	Cucumis melo	Setaria viridis	7.93	24.92	87.8	82	forward
CNT3075006	Cucumis melo	Brassica juncea	9.48	21.78	83.67	98	forward
CNT30454500	Cucumis melo	Saccharum spontaneum	8.22	23.48	88.24	85	forward
CNT30135064	Cucumis melo	Lolium perenne	11.8	21.37	83.61	122	forward
CNT3015201	Cucumis melo	Zea mays	8.22	21.79	85.88	85	forward
CNT30104607	Cucumis melo	Oryza rufipogon	8.61	24.79	85.39	89	forward
CNT30578384	Cucumis melo	Oryza barthii	8.61	22.7	84.27	89	forward
CNT30582394	Cucumis melo	Echinochloa crusgalli	7.93	21.98	87.8	82	forward
CNT30557050	Cucumis melo	Panicum hallii	11.7	31.84	84.3	121	forward

Expression of CNT3037519

Peptides detected in this lncRNA

>peptide 1 (34 aa)
RYAITKDLTRGLAENIQFYVSITQTWKLHCRNRK*

>peptide 2 (33 aa)
MIQNLLDVVREVQDIEEEVCPDHTGDTAEEEPA*

>peptide 3 (30 aa)
SICNHKGSNKRFGRKYTILCFHNTDMEVAL*

>peptide 4 (30 aa)
MFTLFILISLHKFLKIFFWLTLLVSHTHLH*

>peptide 5 (52 aa)
MPRSHRRYRRRRTRLRILPTHRLFAEDQGSSSCQSKSMMVRPPAASEPAPPA*

Sequence

>CNT3037519
TCGATATGCAATCACAAAGGATCTAACAAGAGGTTTGGCAGAAAATATACAATTTTATGTTTCCATAACACAGACATGGAAGTTGCATTGTAGAAACAGA
AAATGATACAAAATCTACTTGACGTAGTAAGGGAGGTCCAAGACATAGAGGAGGAAGTATGCCCAGATCACACCGGAGATACCGCCGAAGAAGAACCCGC
CTGAGAATTTTGCCCACCCATCGGCTGTTTGCAGAGGATCAGGGGTCTTCTTCCTGCCAGTCAAAGTCAATGATGGTGCGACCACCGGCAGCCAGTGAGC
CTGCTCCTCCGGCGTAGGCTGTGTTCCTTAGAGGGCCAGCTTTGACAAATGGACCAACCAGAAAGAAACCGTGAGCCAGGCCCACTTCAATTCCCCTCAG
CAATGGACTGACTGCTGTTCTGTAGGCTGGGAGGTTTGAAAGGTACCATGCTATCAGTGGGCTTGAGGTTACTGGAGTCTCAAGGCTTCCAATGAATGGG
TCTCCATTGATTGGCTGGATCACTTGGTAAGTTGGCTGCAACAGTTTCAATACCCCATTAACATCTTTGCATTGCATGTTTTTTTTTTATCCACTTTGAA
TACCTTTTTCTTTTTCTAAGTACTATCTTCACATGCATTTTCTGCATTAATTTTTCTTTCACTAACGGATCTTTTCTCTACCTAACCGTTACCGGCTTCT
TCTCATTTGTGATCCTCCAAGATGGAAGGTGTACATGCTAATTATCTTTGAGCTATACTTATGTTCACTCTCTTCATCTTAATATCTTTACATAAATTTT
TAAAGATTTTTTTCTGGTTAACTCTCCTCGTAAGTCACACACACTTACATTAAAAGCACTCTCAAACATACTCTTTAAAATTTTATTCAACTAATACGTT
TATATTACTCTGACTCGTTGAGATTGAAGTTAATATCCCTTGAAATAGTATACATTACATGGCATATAATATATATATATCTTGAAAGCTCCAAAGAGAA
GCAGATGATGTAAGATTGAGAAATGGGATTGTTT