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Detailed information on CNT30374695


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONBNAT008115, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30730436Arabidopsis thalianaCorchorus capsularis39.1586.7994.931222reverse complement
CNT3072442Arabidopsis thalianaQuercus suber40.6973.1690.791270reverse complement
CNT30507879Arabidopsis thalianaNicotiana attenuata40.8886.3393.031276reverse complement
CNT3047192Arabidopsis thalianaPrunus dulcis41.4638.1392.191294reverse complement
CNT30544747Arabidopsis thalianaBrassica napus42.4551.7496.911325forward
CNT30234560Arabidopsis thalianaBrassica oleracea41.1467.3397.351284forward
CNT30312051Arabidopsis thalianaCamelina sativa42.8725.697.681338forward
CNT30262710Arabidopsis thalianaBrassica rapa42.4556.7297.131325forward

Expression of CNT30374695

Peptides detected in this lncRNA

>peptide 1 (96 aa)
MLTLEPFSEDQGRSAVHPRGIPPISFLAPYGFTHPLTRTHVRLLGPCFKTGRMGSPQADARSTLMPRHAVRRVLQTTITAATSPQAYQKPGLRPPP*

>peptide 2 (68 aa)
MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRPRFCSDRRALLLIEAWLLPRRPGELLHTP*

>peptide 3 (82 aa)
MVRLVFRPYTQVRRTICTSVSLRASTRVSSGFTPLRHSSPSFGSRQACSHSNPSQKIKVGRRCTREGSRQSASLRLTGLLTR*

>peptide 4 (37 aa)
MAHLELSIPCDGSTKQPTRPTYLKFENRSRALRPQCL*

>peptide 5 (38 aa)
MCRPSQTPHLTMSSARIDPPKRALGPKTGVVPRLRFTE*

Sequence

>CNT30374695
AAGTTGGGAATTCGTTAAGGAGCTGTTGCTTTGTTAGTGTAGAAACACTTGTGTAGAATTGGGGATTGTTTTTTTTGGAGTGATTTAGGGGAGGGTCGAA
TCTTAGCGACAAAGGGCTGAATCTCAGTGGATCGTGGCAGCAAGGCCACTCTGCCACTTACAATACCCCGTCGCGTATTTAAGTCGTCTGCAAAGGATTC
TACCCGCCGCTCGGTGGTAATTATAATTCAAGGCGGTCCGAACGACGCTTCCGCCGAACGGACTTAGCCAACGACACGTGCCTTTGGGAGCCTAAGCTCC
TACTGAGGGTCGGCAATCGGGCGGCGGGCGCATGCGTCGCTTCTAGCCCGGATTCTGACTTAGAGGCGTTCAGTCATAATCCAGCGCACGGTAGCTTCGC
GCCACTGGCTTTTCAACCAAGCGCGATGACCAATTGTGCGAATCAACGGTTCCTCTCGTACTAGGTTGAATTACTATCGCGACGCGGGCATCAGTAGGGT
AAAACTAACCTGTCTCACGACGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTCGTACTGAAAATCAGAATCAAACGAGCTTTTACCCTTT
TGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATCTTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAAT
GTCCTCCGCCCGGATCGACCCGCCGAAGCGAGCCTTGGGACCAAAAACAGGGGTTGTACCCCGCCTCCGATTCACGGAGTAAGTAAAATAACGTTAAAAG
TAGTGGTATTTCACTTGCGCCGAAGCTCCCACTTATCCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCC
CCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATT
AGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGG
CAGAAATCACATTGCGTTAGCATCCGCAGGGACCATCGCAATGCTTTGTTTTAATTAAACAGTCGGATTCCCCTTGTCCGTACCAGTTCTGAGCTGACTG
TTCGACGCCCGGGGAAAGCTCCCGAGAGAGCCGTTCCCAGTCCGTCCCCCGGCCGGCACGCGGCGACCCGCTCTCGCCGCGGAAGCAGCTCGAGCAGTCC
GCTGACAGCCGACGGGTTCGGAACTGGGACCCCCGAGCCCAGCCCTCAGAGCCAATCCTTTTCCCGAAGTTACGGATCCATTTTGCCGACTTCCCTTGCC
TACATTGTTCCATCGACCAGAGGCTGTTAAACAGAAAAGATAACTCTTCCCGAGGCCCCCGCCGACGTCTCCGGACTCCCTAACGTTGCCGTCAACCGCC
ACGTCCCGGTTCCGGAATTTTAACCGGATCCCCTTTCGAAGTTCGCGCTTAAGCGCTATCAGACGGGTTTCCCCCGACTCTTAGGATCGACTAACCCATG
TGCAAGTGCCGTTCACATGGAACCTTTCCCCTCTTCGGCCTTCAAAGTTCTCATTTGAATATTTGCTACTACCACCAAGATCTGCACCGACGGCCGCTCC
GCCCGGGCTCGCGCCCTAGGTTTTGCAGCGACCGCCGCGCCCTCCTACTCATCGAGGCCTGGCTCTTGCCCCGACGGCCGGGTGAGTTGTTACACACTCC
TTAGCGGATTTCGACTTCCATGACCACCGTCCTGCTGTCTTAATCGACCAACACCCTTTGTGGGTTCTAGGTTAGCGCGCAGTTGGGCACCGTAACCCGG
CTTCCGGTTCATCCCGCATCGCCAGTTCTGCTTACCAAAAATGGCCCACTTGGAGCTCTCGATTCCGTGTGACGGCTCAACAAAGCAGCCGACACGTCCT
ACCTATTTAAAGTTTGAGAATAGGTCGAGGGCGTTGCGCCCCCAATGCCTCTAATCATTGGCTTTACCCGATAGAACTCGCGTCCGAGCTCCAGCTATCC
TGAGGGAAACTTCGGAGGGAACCAGCTACTAGATGGTTCGATTAGTCTTTCGCCCCTATACCCAAGTCAGACGAACGATTTGCACGTCAGTATCGCTGCG
GGCTTCCACCAGAGTTTCCTCTGGCTTTACCCCGCTCAGGCATAGTTCACCATCTTTCGGGTCCCGACAGGCATGCTCACACTCGAACCCTTCTCAGAAG
ATCAAGGTCGGTCGGCGGTGCACCCGCGAGGGATCCCGCCAATCAGCTTCCTTGCGCCTTACGGGTTTACTCACCCGTTGACTCGCACACATGTCAGACT
CCTTGGTCCGTGTTTCAAGACGGGTCGAATGGGGAGCCCACAGGCCGACGCCCGGAGCACGCTGATGCCGAGGCACGCCGTTAGGCGCGTGCTGCAGACC
ACGATCACGGCAGCGACGTCTCCACAAGCGTATCAAAAGCCCGGGCTTAGGCCGCCACCGTAATCCGCGTCGGTCCACGCCCCGAATCGATCGGCGGACC
GGATTGCTCCGTTCCGCATCCGACCAGGACGCATCGCCGGCCCCCATCCGCTTCCCTCCCGACAATTTCAAGCACTCTTTGACTCTCTTTTCAAAGTCCT
TTTCATCTTTACCTCGCGGTACTTGTTCGCTATCGGTCTCTCGCCCGTATTTAGCCTTGGACGGAATTTACCGCCCGATTGGGGCTGCATTCCCAAACAA
CCCGACTCGTAGACAGCGCCTCGTGGTGCGACAGGGTCCGGGCACGACGGGGCTCTCACCCTCTCTGGCGCCCCTTTCCAGGGAACTTAGGCCCGGTCCG
TCGCTGAGGACGCTTCTCCAGACTACAATTCGAACGCCGAAGACGTCCGATTTTCAAGCTGGGCTCTTCCCGGTTCGCTCGCCGTTACTAAGGGAATCCT
TGTTAGTTTCTTTTCCTCCGCTTATTGATATGCTTAAACTCAGCGGGTAATCCCGCCTGACCTGGGGTCGCTATATGGACTTTGGGTCATCTACAGCTTT
CGGACAAGAGCGACCGATAAA