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Detailed information on CNT30374650


BLAST search results

BLAST vs Swiss-Prot:
sp|P25818|TIP11_ARATH, E-value = 3e-60

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30549654Arabidopsis thalianaIpomoea triloba17.6221.3985.7177forward
CNT30619970Arabidopsis thalianaCajanus cajan23.1126.385.15101forward

Expression of CNT30374650

Peptides detected in this lncRNA

>peptide 1 (57 aa)
LLVCGVDEENFVDESSDSTADERSGPVDPVVGPCPAHHRCTESDGRVNVSTRDVGTN*

>peptide 2 (55 aa)
MPEPEPATTKIKVEMNSANAAFKASGRVASSGRPMAMFLIGMIGRLRFKLQDARRV

Sequence

>CNT30374650
GCTGCTCGTGTGTGGTGTTGATGAAGAAAACTTCGTAGATGAGTCCAGCGATTCCACCGCCGACGAGAGGTCCGGCCCAGTAGACCCAGTGGTTGGTCCA
TGTCCAGCTCACCACCGCTGCACCGAAAGTGACGGCAGGGTTAACGTGTCCACCAGAGATGTTGGCACCAACTGAGACAGCGACGAAGAGTCCAAAGGCA
TGAGCCACTGCAGCAGCTACGAGACCAGAAGGAGTGGTGGCTCCGTTTTCAGTGAGCTTGTTGAAAGCCATGCCAGAGCCTGAACCGGCGACGACAAAGA
TCAAAGTTGAAATGAACTCAGCCAACGCCGCCTTTAAGGCATCGGGACGGGTGGCTTCATCTGGACGGCCAATGGCGATGTTTCTGATCGGCATGATCGG
ACGGCTGAGATTTAAGCTTCAAGATGCTAGAAGAGTG