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Detailed information on CNT30373937


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SHR7|CB21_ARATH, E-value = 4e-97

BLAST vs NONCODE:
NONATHT001041, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30631092Arabidopsis thalianaVigna unguiculata91.0434.1381.09386forward
CNT3085816Arabidopsis thalianaVigna radiata80.4253.4579.47341forward
CNT30234046Arabidopsis thalianaBrassica oleracea90.3366.1589.3383forward

Expression of CNT30373937

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MSPGQPRVQRCPSRSLRGILRLGRTVYSPRMVLSTWDGLV

>peptide 2 (33 aa)
ALRVDQVRVSERSTSDSVAFNEPHEHNLNSPDG*

Sequence

>CNT30373937
GCTTTGCGCGTGGATCAAGTTAGGGTTTCCGAGAGGTCCACCTCCGATTCTGTAGCCTTCAATGAACCCCATGAGCACAACTTGAACAGCCCAGATGGCT
AAGATGCTTTGCGCGTGGATCAAGTTAGGGTTTCCGAGGTAATCAAGACCTCCTTCTGAGAAAATCTGAGAACCTGCCTTGAACCACACGGCTTCTCCGA
ATTTAACACCGTTCTTGGAGAGAATCTCAGGGAATGTGCATCCGAGAGCACCCAACATAGCCCATCTGCTGTGGATTACTTCAAGCTCACGGTTCTTAGC
GAATGTCTCCGGGTCAGCCGAGAGTCCAGCGGTGTCCCAGCCGTAGTCTCCGGGGTATTCTCCGGTTAGGTAGGACGGTGTATTCTCCGAGAATGGTCCT
AAGTACTTGGGACGGTCTGGTCCG