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Detailed information on CNT30373595


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30239051Arabidopsis thalianaBrassica oleracea33.7128.5982.87181forward

Expression of CNT30373595

Peptides detected in this lncRNA

>peptide 1 (80 aa)
ERTFVSNNTIDAIPDPTAVPLTSARPSLGWRSKNPELIPANLKASSAVKASPLGPVALELGRPPLVQWSESHHQDSQLAS*

>peptide 2 (31 aa)
MATFHLLRCSSPVERILRVDHHVLCLDVSAA*

>peptide 3 (74 aa)
MVRVSPPRFTTGFLNSATILFTSSKWLPFICSAAAPQLRGSSALITMFFVLMSPPHNIASTPPPLLLCAPLISI*

Sequence

>CNT30373595
AGAGAGAACATTCGTTTCGAATAACACCATTGACGCCATTCCAGATCCAACCGCCGTGCCATTGACTAGCGCGAGACCTTCCTTAGGCTGGAGATCAAAG
AATCCGGAGCTGATTCCTGCTAATTTGAAAGCTTCCTCTGCTGTTAAAGCTTCACCGTTGGGACCAGTAGCTTTGGAATTGGGACGACCGCCACTTGTCC
AATGGTCAGAGTCTCACCACCAAGATTCACAACTGGCTTCCTAAACTCAGCAACCATTCTCTTCACTTCATCCAAATGGCTACCTTTCATTTGCTCCGCT
GCAGCTCCCCAGTTGAGAGGATCCTCCGCGTTGATCACCATGTTCTTTGTCTTGATGTCTCCGCCGCATAACATAGCGTCCACTCCTCCTCCGTTGCTCT
TGTGTGCCCCGTTAATCTCCATTTAGACTTTTGATCTTAGTTTTACAATAGAAGATTAACTAAGAGGAGATTACAAGATCTCTAAAAGAAAGAAAGAAGA
TAGGAGCTTATTTGTAATATTGTTGGTTAAGGAATTG