Detailed information on CNT30373585


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30378945Arabidopsis thalianaManihot esculenta19.9223.4489.849forward
CNT30235921Arabidopsis thalianaBrassica oleracea56.9163.6490140forward
CNT30261311Arabidopsis thalianaBrassica rapa36.5923.6287.7890forward
CNT30479631Arabidopsis thalianaArabidopsis halleri76.0226.3891.44187forward

Expression of CNT30373585

Peptides detected in this lncRNA

>peptide 1 (31 aa)
PFGETSTLLVVSSGARAEGATWLRIAETEEG*

Sequence

>CNT30373585
CCATTTGGCGAAACGAGCACCTTGTTGGTAGTAAGCAGCGGTGCGAGAGCGGAAGGTGCCACGTGGCTGCGAATAGCTGAGACAGAGGAAGGTTGACGGA
GGAGAAGACTCTGTCCCTTAACCCAATCAGATTTCACCGGTGAGGCTTTGAGCATAGTCGCAGTGCTTGACGCCATTGTTGCTAGTACTTGCTTGCTAGT
GAGAGCTTAAAACGCTTGTAACGCACTACGATAAACAATCGTGCTT