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Detailed information on CNT3037313


BLAST search results

BLAST vs Swiss-Prot:
sp|P31853|ATPF2_SPIOL, E-value = 1e-34

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30512572Cucumis meloJuglans regia65.5336.2680.97289forward
CNT30703611Cucumis meloQuercus lobata47.8536.5780.57211forward
CNT30381141Cucumis meloManihot esculenta6151.4380.67269forward
CNT30406680Cucumis meloBeta vulgaris24.2616.3185.05107forward
CNT30653577Cucumis meloRosa chinensis29.9325.0580.3132forward
CNT3049179Cucumis meloCucumis sativus65.9986.8792.1291forward

Expression of CNT3037313

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MENLGVLLEMERGGERGLEEAMITFAMAG*

>peptide 2 (44 aa)
MIGRVRLKSKRAAFSISSASEGGAKERDVAAKRERDLRVEELWD*

>peptide 3 (41 aa)
LMTAAACSSSCLTPSEVSLTLLSFSLMAASLSSMNFPSGEK*

>peptide 4 (75 aa)
HDSGSLFVQLLDPLGGVFNATQLLFNGGVSFIHEFSEWGEVDFVEPDHEEEELSHHDRESEVEVEESGLFDLFSE*

Sequence

>CNT3037313
CTCATGACAGCGGCAGCTTGTTCGTCCAGCTGCTTGACCCCCTCGGAGGTGTCTTTAACGCTACTCAGCTTCTCTTTAATGGCGGCGTCTCTTTCATCCA
TGAATTTTCCGAGTGGGGAGAAGTAGATTTTGTCGAGCCCGACCATGAGGAGGAGGAATTGAGCCATCATGATAGGGAGAGTGAGGTTGAAGTCGAAGAG
AGCGGCCTTTTCGATCTCTTCAGCGAGTGAAGGGGGAGCGAAGGAGAGAGATGTGGCGGCGAAGAGGGAGAGGGATTTGAGAGTGGAGGAATTGTGGGAT
TAGGGTTAGGGTTTTAGGGATGGAGAATTTGGGGGTTTTGTTGGAGATGGAAAGAGGAGGGGAGAGGGGTTTGGAAGAGGCCATGATAACGTTCGCCATG
GCTGGGTAGAAATGGAGGTTATGGAGGTCTGAGAGAGATAA