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Detailed information on CNT30372986


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9ASR1|EF2_ARATH, E-value = 0.0

BLAST vs NONCODE:
NONGMAT000778, E-value = 6e-20

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675350Arabidopsis thalianaSetaria viridis14.3870.6782.31147forward
CNT30532226Arabidopsis thalianaEucalyptus grandis33.1746.8981.71339forward
CNT30547527Arabidopsis thalianaIpomoea triloba26.9163.5181.09275forward
CNT30512729Arabidopsis thalianaJuglans regia48.4348.182.22495forward
CNT30276060Arabidopsis thalianaChenopodium quinoa34.0554.8983.05348forward
CNT30379936Arabidopsis thalianaManihot esculenta17.7154.1985.08181forward
CNT3045373Arabidopsis thalianaPrunus dulcis45.359.0682.07463forward
CNT30191304Arabidopsis thalianaSecale cereale40.4131.7483.05413forward
CNT30300473Arabidopsis thalianaTriticum aestivum46.5849.1782.14476forward
CNT30395070Arabidopsis thalianaTriticum turgidum34.4446.0181.53352forward
CNT30510505Arabidopsis thalianaSolanum lycopersicum48.4345.5884.65495forward
CNT30441158Arabidopsis thalianaAegilops tauschii46.5862.7182.14476forward
CNT3059659Arabidopsis thalianaArabidopsis lyrata21.1449.7796.76216forward
CNT30684236Arabidopsis thalianaTriticum urartu34.4442.8282.1352forward
CNT30345702Arabidopsis thalianaEragrostis tef42.4753.7180.88434forward
CNT30359537Arabidopsis thalianaLactuca sativa31.1248.2581.13318forward
CNT30154011Arabidopsis thalianaPrunus persica9.8835.9485.15101forward
CNT30332479Arabidopsis thalianaDioscorea rotundata10.1836.7584.62104forward
CNT30149525Arabidopsis thalianaBrachypodium distachyon9.8833.4483.17101forward
CNT30100260Arabidopsis thalianaOryza rufipogon41.158.582.14420forward

Expression of CNT30372986

Peptides detected in this lncRNA

>peptide 1 (69 aa)
MLGSSLGPIRPSSIASARPSSMGLASMYRRLCLLGDLLITVRVDLSQTVSRKETTGSDLIISAPPMKSS*

>peptide 2 (35 aa)
MCSPDSSIVHTTIGSDLANLLRPSTNLGRSDATLH*

Sequence

>CNT30372986
CTTCCTGATATCAGCCACCAAAACTGAAGCCTGAGTACCTGGCTCAAGAGGGTCAGAAGACATCATTTCCCAATGATCAAACACACACTGTGGGAATGCC
TGTCCTGAGGTTGCTGCCCTAAGCTGACTTGAGAATCCGAAAGACTCCACAACAGGCAGGTATGCCTTGATGTTGTACAAGGGAGTTCCTGGCCTCTGCA
TCTCCTCGAACACGTGTCCACGCTTCTGATTCAGCACACTGTAGATTCCTCCAAGAGCTCCCTCTGGTGCCTGGATCTCAACCATGTAAACCGGCTCCAA
AAGTCTGGGCTTAGCTGTGATCTGGGAAGCGTATATGACCCTTCTGGCTGTGGGGATAACCTGACCACCTCCTCTGTGGATGGCATCAGAGTGAAGCACC
ACATCACATACCTCAAAACAGATACCTCTCATGTTCTCTTCAGCAAGAGGACCTTCCTTGGACGCCCACTGGAAACCAGCAACAACTGAATCCTTGATTT
CGTTAAGGTACTGAACTCCCTTACACATATCGACAACCATGTTAGGGTCATCCCTTGGGCCAATACGTCCATCATCAATAGCCTCAGCTAGACCTTCCTC
CATGGGTCTTGCTTCCATGTACAGACGGTTATGCTTGTTAGGAGACTTACTCATAACTGTGCGAGTAGATCTATCACAAACTGTCTCACGGAAGGAGACC
ACAGGGTCTGACTTGATAATTTCAGCACCACCCATGAAATCATCCTGAAGATCCTTAAGACAAATCTCAAGATGGAGTTCTCCTGCACCAGCAACAATGT
GCTCACCTGATTCCTCCATTGTACACACAACCATAGGATCAGACTTGGCCAACCTCTTGAGACCCTCAACCAACTTGGGAAGGTCAGACGCAACCTTACA
CTGAACAGCAACACGAACAACAGGAGACACAGAAAACTTCATAGCACGAATGGGGTGAGCATCAACTTCCTTCTCATTAGTCAATGTAGCATTCTTGGTG
ATGAACTGATCCAGCCCAACCA