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Detailed information on CNT30372781


BLAST search results

BLAST vs Swiss-Prot:
sp|P29513|TBB5_ARATH, E-value = 1e-41

BLAST vs NONCODE:
NONPOPT002020, E-value = 2e-16

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30569889Arabidopsis thalianaVitis vinifera49.4830.0481.12143forward

Expression of CNT30372781

Peptides detected in this lncRNA

>peptide 1 (59 aa)
MYCCEPREVRGAKPTMKKWRRGNGIRFTASFLRSEFSCPGNLKEQVTPLIVAEIKWFKSP

>peptide 2 (34 aa)
EFLFCMFRICSSTSFVLICPLKIAEAVSQLRNGE*

Sequence

>CNT30372781
ACGAGTTCTTGTTCTGTATGTTTAGGATTTGCTCGTCGACTTCTTTTGTGCTCATCTGTCCTCTGAAAATAGCAGAGGCTGTGAGTCAGCTCAGGAACGG
TGAGTGAGATGTATTGTTGCGAGCCACGGGAAGTGAGGGGCGCAAAACCCACCATGAAGAAATGGAGACGAGGGAATGGGATTAGGTTCACCGCGAGTTT
CCTGAGGTCAGAGTTTAGTTGTCCGGGGAACCTTAAGGAGCAAGTCACACCGCTCATTGTTGCGGAGATCAAATGGTTCAAGTCTCCAA