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Detailed information on CNT30372291


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30670613Arabidopsis thalianaSetaria viridis36.8631.4484.43122forward
CNT30302990Arabidopsis thalianaTriticum aestivum32.3337.6885.98107forward
CNT309074Arabidopsis thalianaZea mays36.8642.3686.07122forward
CNT30649581Arabidopsis thalianaRosa chinensis27.7914.4785.8792forward
CNT30595676Arabidopsis thalianaOryza meridionalis29.6124.583.6798forward

Expression of CNT30372291

Peptides detected in this lncRNA

>peptide 1 (68 aa)
MKSYSESQVDALAQNSRSGKRMGATRDQMKRPAVAQLATRHPPAYHFHQLKLTSRLGALQSTCSQGRR*

Sequence

>CNT30372291
GTGATTAAGCACACGATGTTCTATTATAGTAGAAAGATCGAATATTTTTTTACAAATTGAAGATTCATGAAAAGTTATTCAGAATCTCAAGTAGATGCAT
TAGCTCAGAACTCACGGTCGGGGAAGAGAATGGGAGCAACAAGGGACCAGATGAAGAGACCAGCAGTGGCCCAGCTGGCCACCCGACATCCACCAGCTTA
CCACTTTCACCAACTGAAGTTGACCAGCCGGTTAGGAGCATTGCAGAGTACATGCTCGCAAGGGAGAAGATGATGTGGAAGAATGCGTATGAGTATGAAA
CTGGTTTTTTATTCTCTTTCTCTTCCTTCTC