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Detailed information on CNT30371985


BLAST search results

BLAST vs Swiss-Prot:
sp|P13951|RBS_SINAL, E-value = 5e-26

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30525466Arabidopsis thalianaPhaseolus vulgaris10.3323.2389.8669forward
CNT3075086Arabidopsis thalianaBrassica juncea34.5826.7790.48231forward
CNT30260270Arabidopsis thalianaBrassica rapa37.8738.5784.58253forward

Expression of CNT30371985

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MTCMQLTLPPLLVMEVMSLLALRVAGKAAEDLSPLKGATIVA*

Sequence

>CNT30371985
AGAATATGTCTCGCAAACCGGAAAACAAACGTTAAGTCCGGAAATTAAAACCCAAGAAAGAAGAAAAAAGCAGAAAAACAAGGGATAAAATCAAAGATGG
GGGATAAAGTTTTGAGGTTTACACAAAAGCAAAGGGAAATTAACCGGTGAAGCTTGGTGGCTTGTAGGCAATGAAACTGATGCACTGGACTTGACGGGTG
TTGTCGAATCCGATGATCCTAATGAAGGCATTGGGGTACTCCTTCTTGCACTCTTCCACTTCCTTCAACACTTGAGCGGAGTCGGTAGTCAACTTCCTTA
GCCAATTCGGAATCGGTAAGGTCAGGAAGGTAAGAGAGAGTCTCAAACTTCTTCTTTCCAATCGGAGGCCACACCTATTTTTTCGATTTTTCCAATGATA
TTAGTTTATGTAGATTCGAAGAAAGAACCGAAAAAAATCATATGGAATAATAAAAAAGTGAAAGAAGAAATATAAATGACCTGCATGCAGTTAACTCTTC
CGCCGTTGCTTGTGATGGAAGTAATGTCGTTGTTAGCCTTGCGGGTGGCTGGGAAGGCAGCGGAGGACTTAAGTCCGTTGAAAGGAGCGACCATAGTGGC
CTGAGCCGGAGAGGCAACCATAGTAGCGGAAGAGAGCATAGAGGAAGCCATTGTTCTTCTTTACTCTT