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Detailed information on CNT30371945


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SA56|PSAD2_ARATH, E-value = 3e-71

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30515406Arabidopsis thalianaJuglans regia46.7439.5782.09201forward
CNT30269143Arabidopsis thalianaChenopodium quinoa54.8830.3780.51236forward
CNT30403648Arabidopsis thalianaBeta vulgaris54.1921.0179.4233forward
CNT30630495Arabidopsis thalianaVigna unguiculata44.4233.6981.68191forward
CNT30488386Arabidopsis thalianaOlea europaea22.7913.385.7198forward
CNT3089114Arabidopsis thalianaVigna radiata44.4219.8581.68191forward
CNT30171560Arabidopsis thalianaTrifolium pratense51.6327.5483.78222forward
CNT30358694Arabidopsis thalianaLactuca sativa65.3563.1582.21281forward
CNT30174623Arabidopsis thalianaVigna angularis23.2611.7486100forward
CNT30724394Arabidopsis thalianaLupinus angustifolius25.1217.7384.26108forward

Expression of CNT30371945

Peptides detected in this lncRNA

>peptide 1 (33 aa)
WIRFLWINSIFRVKILNLSVREHSVKLVSDLVL*

>peptide 2 (33 aa)
MERDLGRWLDEKRWSFLTAEVVVVMAGLKIPAA*

Sequence

>CNT30371945
CCTGGATTCGCTTTCTCTGGATAAACTCCATCTTTCGGGTGAAGATATTGAACCTCTCCGTTAGGGAACACTCTGTAAAACTGGTAAGTGATCTTGTACT
TTGACCTCAACCTCGTACCTAAAGCCAAACACTGTTCTTTCCTCGCCAGTTTCAATAGATTCGGTCCTTCTCTCATTATCGCAGCTCCTCCTGTTGGCAT
CTCAAAGATTTGTTCTTTCGGTGAGTTCCATGTGATCACGTAAAATTCCTCTACTTGTGCTTTACGGAGGAGACCTCCTGTGCTTCCGGCGAAGATTGGT
GATGGAGAGAGACTTGGGACGGTGGCTTGATGAGAAGAGGTGGAGTTTCTTGACGGCGGAAGTAGTGGTTGTTATGGCGGGGCTGAAGATTCCGGCGGCT
TGAGTTGCCATAGTTTCTTCTGTTTTCTCT