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Detailed information on CNT30371709

BLAST search results

BLAST vs Swiss-Prot:
sp|Q8W4H7|EF1A2_ARATH, E-value = 2e-117

BLAST vs NONCODE:
NONBNAT007048, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30691950	Arabidopsis thaliana	Oryza sativa	99.53	40.7	87.99	641	forward
CNT30521093	Arabidopsis thaliana	Setaria italica	99.53	57.39	88.61	641	forward
CNT30639730	Arabidopsis thaliana	Nymphaea colorata	86.65	60.72	83.33	558	forward
CNT30535563	Arabidopsis thaliana	Eucalyptus grandis	99.53	78.55	84.71	641	forward
CNT30316757	Arabidopsis thaliana	Corylus avellana	97.83	52.59	86.35	630	forward
CNT30518094	Arabidopsis thaliana	Juglans regia	94.88	65.28	85.27	611	forward
CNT30618435	Arabidopsis thaliana	Sesamum indicum	49.69	65.17	85.62	320	forward
CNT30525464	Arabidopsis thaliana	Phaseolus vulgaris	88.35	100.71	80.84	569	forward
CNT30629544	Arabidopsis thaliana	Vigna unguiculata	61.49	52.38	85.61	396	forward
CNT30287202	Arabidopsis thaliana	Triticum aestivum	53.11	47.57	86.84	342	forward
CNT30387246	Arabidopsis thaliana	Triticum turgidum	95.5	53.43	85.37	615	forward
CNT30564256	Arabidopsis thaliana	Actinidia chinensis	90.53	50.09	87.14	583	forward
CNT3084148	Arabidopsis thaliana	Vigna radiata	66.61	26.34	84.85	429	forward
CNT30541590	Arabidopsis thaliana	Brassica napus	100	55.37	93.32	644	forward
CNT30440472	Arabidopsis thaliana	Aegilops tauschii	51.55	55.8	86.14	332	forward
CNT30246955	Arabidopsis thaliana	Avena sativa	95.81	34.96	88.01	617	forward
CNT30665783	Arabidopsis thaliana	Triticum dicoccoides	95.5	67.51	83.74	615	forward
CNT3059230	Arabidopsis thaliana	Arabidopsis lyrata	99.53	53.33	96.57	641	forward
CNT30614135	Arabidopsis thaliana	Arabis alpina	95.5	39.42	93.82	615	forward
CNT30598511	Arabidopsis thaliana	Fraxinus excelsior	50.78	50.23	87.46	327	forward
CNT30449969	Arabidopsis thaliana	Saccharum spontaneum	96.27	49.13	87.26	620	forward
CNT30132437	Arabidopsis thaliana	Lolium perenne	95.5	51.16	85.53	615	forward
CNT3011166	Arabidopsis thaliana	Zea mays	95.81	43.64	87.2	617	forward
CNT30685098	Arabidopsis thaliana	Triticum urartu	60.87	26.67	88.78	392	forward
CNT30480841	Arabidopsis thaliana	Arabidopsis halleri	61.65	63.93	96.73	397	forward
CNT30368495	Arabidopsis thaliana	Sorghum bicolor	94.41	59.67	87.34	608	forward
CNT30355521	Arabidopsis thaliana	Lactuca sativa	92.55	62.47	86.58	596	forward
CNT3052982	Arabidopsis thaliana	Amborella trichopoda	45.81	22.55	85.42	295	forward
CNT3037774	Arabidopsis thaliana	Cucumis melo	60.56	50.45	85.9	390	forward
CNT30148140	Arabidopsis thaliana	Brachypodium distachyon	49.69	84.21	89.06	320	forward
CNT30100761	Arabidopsis thaliana	Oryza rufipogon	53.11	59.69	87.72	342	forward
CNT30580076	Arabidopsis thaliana	Echinochloa crusgalli	39.6	19.27	90.2	255	forward
CNT30496874	Arabidopsis thaliana	Digitaria exilis	100	57.45	88.35	644	forward
CNT30603788	Arabidopsis thaliana	Oryza punctata	99.53	54.41	87.83	641	forward
CNT30176122	Arabidopsis thaliana	Vigna angularis	99.53	56.63	82.22	641	forward
CNT30113122	Arabidopsis thaliana	Ficus carica	71.74	55.66	85.5	462	forward
CNT3050294	Arabidopsis thaliana	Cucumis sativus	71.89	75.53	83.8	463	forward

Expression of CNT30371709

Peptides detected in this lncRNA

>peptide 1 (54 aa)
RNVQVVGTQRRSPQPWAWLESSSPYQHHHSSRIWAPSQSPYQNACQSWSRSQRT*

>peptide 2 (93 aa)
MMMTWEVKLAAPLAGSSLELDATYPLLRSLTATFLTLNPTLSPGSASRRDSWCISTDLTSVVNPVGAKVTTIPGLIIPVSTRPTGTVPIPPIL*

>peptide 3 (58 aa)
AKRPSGGYSEKVSTTMGLVGVIFTIPASPFFKNLGSFSISLPERLSILVKISENLTAM*

>peptide 4 (68 aa)
ETSKWWVLREGLHNHGLGWSHLHHTSITILQEFGLLLNLLTRTPVNLGQDLRELDCNVRGVWQSRTGA*

Sequence

>CNT30371709
GCGAAACGTCCAAGTGGTGGGTACTCAGAGAAGGTCTCCACAACCATGGGCTTGGTTGGAGTCATCTTCACCATACCAGCATCACCATTCTTCAAGAATT
TGGGCTCCTTCTCAATCTCCTTACCAGAACGCCTGTCAATCTTGGTCAAGATCTCAGAGAACTTGACTGCAATGTGAGAGGTGTGTGGCAATCCAGGACT
GGGGCGTAACCGTTACCAATCTGACCAGGGTGGTTCATGATGATGACCTGGGAGGTGAAGTTAGCAGCACCCTTGGCAGGGTCATCCTTGGAGTTGGATG
CGACGTACCCTCTCTTAAGATCCTTGACAGCAACATTCTTAACATTGAACCCAACGTTGTCACCTGGAAGTGCCTCAAGAAGAGACTCGTGGTGCATCTC
AACAGACTTGACCTCAGTGGTCAATCCTGTGGGAGCAAAGGTCACAACCATACCAGGCTTGATCATACCAGTCTCAACACGTCCCACTGGCACCGTTCCA
ATACCACCAATCTTGTAGACATCCTGAAGTGGGAGACGAAGGGGCTTGTCTGACGGCCTCTTGGGCTCGTTGATCTGGTCAAGAGCCTCAAGGAGAGTTG
GTCCCTTGTACCAGTCAAGGTTGGTGGACCTCTCAATCATGTTG