Detailed information on CNT303716


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30520455Zea maysSetaria italica52.3527.2697.24145forward
CNT30619887Zea maysCajanus cajan32.8535.1482.4291forward
CNT3050430Zea maysCucumis sativus35.0227.3285.5797forward

Expression of CNT303716

Peptides detected in this lncRNA

>peptide 1 (85 aa)
PDQEHKRFSNQQPNHAKKNVAHSYAMRVDSVDLEDGGVARVGEASVLDLLGAQLLDLLRRAAAPAERVKPEATRVPFISTQMNNC*

>peptide 2 (78 aa)
GLIKNIKDSQISNQIMQKKMWRIHMQCGLIQLTWKMVAWPGSARRPFLISLVRSSLIFSGEPLPQPSGSNQRPPGYLS*

Sequence

>CNT303716
GGCCTGATCAAGAACATAAAAGATTCTCAAATCAGCAACCAAATCATGCAAAAAAAAATGTGGCGCATTCATATGCAATGCGGGTTGATTCAGTTGACCT
GGAAGATGGTGGCGTGGCCAGGGTCGGCGAGGCGTCCGTTCTTGATCTCCTTGGTGCGCAGCTCCTTGATCTTCTCCGGCGAGCCGCTGCCCCAGCCGAG
CGGGTCAAACCAGAGGCCACCAGGGTACCTTTCATAAGCACACAGATGAATAATTGTTAGCCTTCGGCAAGGACTAC