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Detailed information on CNT30371574


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SHE8|PSAF_ARATH, E-value = 2e-61

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30641545Arabidopsis thalianaNymphaea colorata31.1418.9481.99161forward
CNT30618119Arabidopsis thalianaSesamum indicum20.1220.2784.62104forward
CNT3019440Arabidopsis thalianaCitrullus lanatus45.8462.5381.43237forward
CNT30525128Arabidopsis thalianaPhaseolus vulgaris49.7159.6379.38257forward
CNT30629169Arabidopsis thalianaVigna unguiculata26.1126.4282.22135forward
CNT30709011Arabidopsis thalianaGlycine max49.7128.380.16257forward
CNT3091235Arabidopsis thalianaSolanum tuberosum33.2714.3680.23172forward
CNT3085970Arabidopsis thalianaVigna radiata50.6834.9880.92262forward
CNT30540068Arabidopsis thalianaBrassica napus48.3634.0190.8250forward
CNT30313614Arabidopsis thalianaCamelina sativa51.6468.8195.13267forward
CNT3075737Arabidopsis thalianaBrassica juncea21.0812.8585.32109forward
CNT30264705Arabidopsis thalianaBrassica rapa48.3629.890.8250forward
CNT308929Arabidopsis thalianaZea mays27.0846.5180.71140forward
CNT30609169Arabidopsis thalianaGossypium raimondii27.6633.8981.82143forward
CNT30716553Arabidopsis thalianaMalus domestica golden29.423.1480.92152forward
CNT30623157Arabidopsis thalianaDaucus carota27.0814.1482.14140forward
CNT30480106Arabidopsis thalianaArabidopsis halleri30.7571.391.19159forward
CNT30620828Arabidopsis thalianaCajanus cajan18.3843.3883.1695forward
CNT3038681Arabidopsis thalianaCucumis melo19.7325.4488.24102forward
CNT30579037Arabidopsis thalianaEchinochloa crusgalli27.0814.8180.71140forward
CNT30174403Arabidopsis thalianaVigna angularis32.8824.4681.18170forward
CNT3040196Arabidopsis thalianaMarchantia polymorpha12.5722.8187.6965forward

Expression of CNT30371574

Peptides detected in this lncRNA

>peptide 1 (71 aa)
MNSPQCRWSPFTIKCGKPFHGLSERFVRSRVENEIRRDSERHGALSGSLEISNSRVLEFWVKCGEKTYGRSF

>peptide 2 (31 aa)
MKPRKMIRLAKGTSMMISFIAGFFSPLIAIK*

Sequence

>CNT30371574
CGACAATGCATTGTTTTTCAATAAGTACAATGGAAAACAAAGAGATTAGAGAGAGTAACACAAAAGCAGAAAACAAGTTCCCTTTTTAAACATCCTTAGC
AATGAGATCACCATTGAGAAACTCTCTGTAGGCAGCAACGGGCCAAATGAAACCACGGAAGATGATCCGACTAGCCAAAGGAACATCGATGATGATCTCT
TTCATCGCGGGTTTCTTCTCACCACTAATAGCTATTAAGTAGCTTCTTCCAACCCACCCGATCCATCCAGCAATGTAGAGGAAAAGAATCCCTGGAGTAA
TGAACTCTCCCCAATGCCGCTGGTCTCCGTTCACTATCAAGTGCGGTAAACCCTTTCATGGATTGAGTGAGAGATTTGTTAGATCTCGGGTTGAGAACGA
GATTCGCCGGGATAGTGAGCGACATGGCGCTTTGTCGGGTTCTTTGGAGATTTCGAATTCTAGGGTTCTGGAGTTTTGGGTGAAGTGTGGAGAGAAGACT
TATGGGAGGAGCTTTAG