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Detailed information on CNT30371496


BLAST search results

BLAST vs Swiss-Prot:
sp|Q2QYL2|NLT2B_ORYSJ, E-value = 2e-31

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30676413Oryza glumipatulaSetaria viridis45.336.5989.63135forward
CNT30524155Oryza glumipatulaSetaria italica5032.8989.93149forward
CNT30444120Oryza glumipatulaAegilops tauschii27.8518.7886.7583forward
CNT30247616Oryza glumipatulaAvena sativa41.9512.8388125forward
CNT30136219Oryza glumipatulaLolium perenne41.2820.4388.62123forward
CNT3068317Oryza glumipatulaLeersia perrieri5029.892.62149forward
CNT30682526Oryza glumipatulaTriticum urartu27.8515.9687.9583forward
CNT30104730Oryza glumipatulaOryza rufipogon89.2677.5588.72266forward
CNT30582166Oryza glumipatulaEchinochloa crusgalli25.1711.969675forward
CNT30498573Oryza glumipatulaDigitaria exilis49.3330.8287.76147forward

Expression of CNT30371496

Peptides detected in this lncRNA

>peptide 1 (86 aa)
MLTPHLEGMLAALPALRPLMLPATFLRQLQAVRRSAVGPTAELTWPQVMATAACGAARSRAATTATNTNCARAMVPTTVARSIGVNW

>peptide 2 (98 aa)
PGAVDGGADGVGDADAALGGDAGGIAGVEAADAAGHVLEAVAGGAAVGGGPNGGVDLAAGDGHGGVRGGEEQSCHNGDQHQLCTGHGSYYCCSIDRCEL

Sequence

>CNT30371496
CCTGGAGCAGTCGATGGAGGGGCTGATGGTGTAGGGGATGCTGACGCCGCACTTGGAGGGGATGCTGGCGGCATTGCCGGCGTTGAGGCCGCTGATGCTG
CCGGCCACGTTCTTGAGGCAGTTGCAGGCGGTGCGGCGGTCGGCGGTGGGCCCAACGGCGGAGTTGACCTGGCCGCAGGTGATGGCCACGGCGGCGTGCG
GGGCGGCGAGGAGCAGAGCTGCCACAACGGCGACCAACACCAACTGTGCACGGGCCATGGTTCCTACTACTGTTGCTCGATCGATCGGTGTGAATTGG