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Detailed information on CNT30371492


BLAST search results

BLAST vs Swiss-Prot:
sp|Q09020|PR4_PHAVU, E-value = 7e-23

BLAST vs NONCODE:
NONORUT002251, E-value = 1e-115

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30524561Oryza glumipatulaSetaria italica29.2413.4887.9157forward
CNT30639598Oryza glumipatulaNymphaea colorata25.8823.2882.01139forward
CNT30533654Oryza glumipatulaEucalyptus grandis26.0728.5787.86140forward
CNT30549672Oryza glumipatulaIpomoea triloba13.5925.1786.373reverse complement
CNT30514302Oryza glumipatulaJuglans regia24.5823.1290.15132forward
CNT30275526Oryza glumipatulaChenopodium quinoa26.6325.9185.31143forward
CNT30180424Oryza glumipatulaSecale cereale27.9323.1892150forward
CNT30221624Oryza glumipatulaHordeum vulgare27.9322.1291.33150forward
CNT30386243Oryza glumipatulaTriticum turgidum27.9322.1692150forward
CNT3084841Oryza glumipatulaVigna radiata24.7724.9183.46133forward
CNT30249706Oryza glumipatulaAvena sativa27.9323.1593.33150forward
CNT30467515Oryza glumipatulaSaccharum spontaneum28.1220.5290.73151forward
CNT30135597Oryza glumipatulaLolium perenne27.9329.0192.67150forward
CNT307034Oryza glumipatulaZea mays28.3119.2689.47152forward
CNT30624138Oryza glumipatulaDaucus carota26.2626.4584.4141forward
CNT30346089Oryza glumipatulaEragrostis tef27.1925.9890.41146forward
CNT30597257Oryza glumipatulaOryza meridionalis89.5796.3999.38481forward
CNT30355824Oryza glumipatulaLactuca sativa26.6318.3381.12143forward
CNT3053146Oryza glumipatulaAmborella trichopoda25.8822.0682.01139forward
CNT30108688Oryza glumipatulaOryza longistaminata59.7857.2299.38321forward
CNT30104475Oryza glumipatulaOryza rufipogon89.5785.5999.17481forward
CNT30578401Oryza glumipatulaOryza barthii100.7496.7898.89541forward
CNT30581754Oryza glumipatulaEchinochloa crusgalli29.2420.5290.45157forward
CNT30118085Oryza glumipatulaOryza nivara89.0189.5199.58478forward
CNT3065513Oryza glumipatulaSelaginella moellendorffii8.7520.793.6247reverse complement

Expression of CNT30371492

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MIYDVNSPLFRSFLSQKGGASSDKRKMEEQKPKEQRPKASENKPVMNE*

Sequence

>CNT30371492
CAGAAAGCAGCATCCCGTGCTTATAATCTCCACCCTTCTACCCCAGTATCCGGACACCCCGTGAAACCCTAGCGACTCTTGCCCCGGCGGCGGCGGCGGC
GGCAGCAAAGGCGAAGATGATCTACGACGTGAACTCCCCTCTCTTCCGCTCCTTCCTCAGCCAGAAGGGCGGGGCCTCCTCCGACAAGAGGAAAATGGAA
GAGCAAAAGCCAAAGGAGCAGAGGCCCAAGGCCAGTGAGAACAAGCCTGTGATGAATGAATGAAGGCTTTCTGATGTGTTTGGTCCTTACAAGGAATAGG
CTTCAATCATGTGATTCCTAGTATGTTTCTGTACTGGTTCTGTTTAAGTGAGTTTGATGTGAACCATGTCTGGAACATCTGAGAACTTCCCAGCTATCAA
TCTTTAATTTTACATCTGAGAACTTCCCAGCTATCAATCTTTAATTTAGCTTGATAATTTTCATGCGTGAGATGGAATGGGATGTTGCTTTGAGATTGAT
GGTTCAAGTTCCCGGTAAAGTTAATCTTGTCCAAACT