Detailed information on CNT30371483


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30347328Oryza glumipatulaEragrostis tef14.3221.0390.1661forward

Expression of CNT30371483

Peptides detected in this lncRNA

>peptide 1 (82 aa)
KVRRQHPLRHQPFHRLLQGALMSGSTSTSDATIIKERSIHRSPALISRLLCACAVVNDRARNIYACCSFVVLLPAYLLRFDS*

>peptide 2 (39 aa)
MNLRGPCTTARFNIYPSNAGSFNNASCQLVFQFISWICI*

>peptide 3 (29 aa)
QSPASTSPTPSALPPTAPGCTDERINVDK*

Sequence

>CNT30371483
TCAAAGTCCGGCGTCAACATCCCCTACGCCATCAGCCCTTCCACCGACTGCTCCAGGGTGCACTGATGAGCGGATCAACGTCGACAAGTGATGCGACAAT
AATAAAGGAGAGATCGATCCATCGATCTCCAGCTCTCATTTCGCGGTTGCTATGTGCATGCGCCGTCGTCAATGATCGAGCTAGAAATATATATGCATGT
TGCTCCTTCGTTGTGTTACTTCCTGCTTACCTGCTGCGGTTTGATAGTTAGCTAGTGTGAGAGACTGTGAGGGTTGATTTTGGGGCAGACGAATCATGAA
TCTCAGAGGACCTTGTACCACTGCACGCTTCAATATATATCCATCAAATGCAGGGTCTTTTAATAATGCATCTTGTCAATTAGTATTTCAGTTCATTAGC
TGGATCTGCATATAATGCTCCTCCAG