Detailed information on CNT30371460


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT002534, E-value = 1e-116

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3068536Oryza glumipatulaLeersia perrieri55.248.7694.2138forward
CNT30104694Oryza glumipatulaOryza rufipogon55.653.88100139forward
CNT30578602Oryza glumipatulaOryza barthii54.454.62100136forward

Expression of CNT30371460

Peptides detected in this lncRNA

>peptide 1 (41 aa)
MILLGNKRGKNEKTLKGKRVAGRANAFTAIYTSKTMLLREGL

>peptide 2 (41 aa)
QYKNQHHVNLKIIIPYIQESESGRPLASHPTCKQLNNHTSR*

Sequence

>CNT30371460
GCAGTACAAGAATCAGCACCATGTTAATTTAAAGATTATAATTCCATACATACAAGAATCAGAATCAGGCAGACCTCTTGCATCTCACCCTACTTGTAAA
CAACTAAACAACCATACAAGCCGATGATCTTGCTAGGCAACAAAAGGGGAAAAAATGAGAAAACTCTAAAAGGAAAAAGGGTTGCTGGGAGAGCAAATGC
ATTCACAGCTATTTACACCTCAAAAACAATGTTGTTGAGGGAGGGGTTAG