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Detailed information on CNT30371449


BLAST search results

BLAST vs Swiss-Prot:
sp|Q0IQK9|NLTP1_ORYSJ, E-value = 2e-30

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30118027Oryza glumipatulaOryza nivara83.4469.4694.94257forward

Expression of CNT30371449

Peptides detected in this lncRNA

>peptide 1 (98 aa)
GAVDGSADGVGDADAALRGDAGGVAGVEPLDAAGRVLEAVARGEAGPNGGVDLAAGDGHGGVRGGEEQSCHNGDQHQLCTGHGSYYCCSIDRCELVRC*

>peptide 2 (81 aa)
MLAALPALSPLMPRAAFLRQLHAVRQGPTAELTWPQVMATAACGAARSRAATTATNTNCARAMVPTTVARSIGVNWFVADEM

Sequence

>CNT30371449
CTGGAGCAGTCGATGGAAGCGCTGATGGTGTAGGGGACGCTGACGCCGCACTTAGAGGGGATGCTGGCGGCGTTGCCGGCGTTGAGCCCCTTGATGCCGC
GGGCCGCGTTCTTGAGGCAGTTGCACGCGGTGAGGCAGGGCCCAACGGCGGAGTTGACCTGGCCGCAGGTGATGGCCACGGCGGCGTGCGGGGCGGCGAG
GAGCAGAGCTGCCACAACGGCGACCAACACCAACTGTGCACGGGCCATGGTTCCTACTACTGTTGCTCGATCGATCGGTGTGAATTGGTTCGTTGCTGAT
GAGATGGA