Detailed information on CNT30371434


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT002110, E-value = 2e-108

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30595610Oryza glumipatulaOryza meridionalis100101.8792.66218forward
CNT30104359Oryza glumipatulaOryza rufipogon100100.4698.17218forward
CNT30578563Oryza glumipatulaOryza barthii100100.4694.5218forward

Expression of CNT30371434

Peptides detected in this lncRNA

>peptide 1 (34 aa)
GLCARKLEVASSTPSKGRFVPLGKCQKKRTRKIC*

Sequence

>CNT30371434
TGGCCTCTGTGCACGCAAGCTTGAGGTAGCAAGTTCGACTCCTTCAAAAGGAAGATTTGTACCGCTAGGGAAGTGCCAGAAGAAAAGAACAAGGAAGATT
TGCTAGCAGGACAAAAGCACGGTAAACTTGGGAAAAAAAAGGTCCAGAAGAAAAGAACAAAGAAGAGCTGCTTGAAGGAGTCGAACTTGCTACCTCAAGC
TTGCGTGCACATAGGCCA