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Detailed information on CNT30371399


BLAST search results

BLAST vs Swiss-Prot:
sp|Q43766|NLTP3_HORVU, E-value = 1e-24

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697881Oryza glumipatulaOryza sativa19.1528.1297.5381forward
CNT30677319Oryza glumipatulaSetaria viridis28.1343.5986.55119forward
CNT30523964Oryza glumipatulaSetaria italica35.747.4885.43151forward
CNT30136754Oryza glumipatulaLolium perenne33.160.3485.71140forward
CNT30342137Oryza glumipatulaEragrostis tef34.2848.1783.45145forward

Expression of CNT30371399

Peptides detected in this lncRNA

>peptide 1 (67 aa)
MIYLLQSVERLMGKPTLTPHLPGTPATVPRLRDLMVPARVLRQRQAAWRSAVVRAALFSPLTPPART*

Sequence

>CNT30371399
ATAAAGAGATATATGCGTGTATATATATATAAAGAGAGAGAGAGAGGAGTCATAGAGAGATGATATACTTGTTGCAGTCGGTGGAGAGGCTGATGGGGAA
GCCGACGTTGACGCCGCACTTGCCGGGGACGCCGGCGACGGTGCCGAGGTTGAGAGACTTGATGGTGCCGGCGAGGGTCTTGAGGCAGCGGCAGGCGGCC
TGGCGGTCGGCGGTGGTGCGGGCGGCGTTGTTCAGCCCCTTGACCCCACCTGCCCGCACGTGATCGCCGCCGACGCCCCCGGCGCCGCCACCACCATCGC
CATCACCATCACCGCCACCACCACCTTACCGTTCAAAGCCGCCATATCTAGACTGATGATCGATCGAGTAGCTAGGTAATTAAGCTAGGTAGCTTCGTTC
AGTGAGAGTGTCTCTCGTCGCCG