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Detailed information on CNT30371395


BLAST search results

BLAST vs Swiss-Prot:
sp|O49290|CPPM_ARATH, E-value = 7e-27

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697920Oryza glumipatulaOryza sativa98.7448.3793.27550forward
CNT30578423Oryza glumipatulaOryza barthii91.9245.5998.83512forward
CNT30118003Oryza glumipatulaOryza nivara101.0895.2696.8563forward

Expression of CNT30371395

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MSSQESRPTRLLNSAKVVRGDLMRWNPISMSSCLV*

>peptide 2 (51 aa)
PNPNIITHTAIYSYVPCNNNTYLTKFTNNAGELINVIHHISWLPDGQPHFD*

Sequence

>CNT30371395
CCCAATCCCAACATAATCACTCACACAGCAATATATAGCTACGTACCATGCAATAATAACACATACCTCACAAAATTCACCAATAATGCAGGAGAATTAA
TCAATGTAATCCACCATATTTCATGGCTCCCTGATGGCCAGCCACATTTCGATTGATAATTTATTCCATTGGTAGCTTGTTCTTGATCGATCTTAGTGTA
CCCCATTGGTAGCGCCATTGGTAGCTCCGTTTCCGGCGACGACGGCGGCCGCCTTGGCCTTAGCCTTCTCCATCTCCGTCGTGGTCGTCGTCTCCGGCGC
CGGCAGTGGCTTGGGAACGGAGGAGTTGACGGAGAAGCGGGCCTCGATGTCGAGCCAGGAGTCGAGGCCGACGAGGTTGTTGAACTCGGCGAAGGTGGTG
AGGGGGGACTTGATGAGGTGGAACCCCATCTCCATGAGCTCCTGCCTCGTGTGAAGCGGCGTCTTCCCGCCCTCCAGCATGTTGCACACGCGATAACCCT
TGGTCCTCCTGCAGATCTCCATCAGCTCCTCGTCGCTCCGCGGCGCCTCCACGAAGC