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Detailed information on CNT30371329


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT001506, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697227Oryza glumipatulaOryza sativa39.4967.2898.78327forward
CNT30555405Oryza glumipatulaOryza glaberrima58.0937.2398.13481forward
CNT30106601Oryza glumipatulaOryza longistaminata39.4937.298.47327forward
CNT30104147Oryza glumipatulaOryza rufipogon55.9252.2698.06463forward
CNT30578166Oryza glumipatulaOryza barthii39.4947.8198.78327forward

Expression of CNT30371329

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MCLDLVSDVASHRLQVSDSGVVLLKPHDALPMEIN*

>peptide 2 (33 aa)
MMRCQWRLIDSRRRPLNFCLVFLEDTRDVFIVM*

Sequence

>CNT30371329
CCCGTCACAGGTGTGGGTGGGGGGATTGACTAGGCTTGACTAGAGTATCCTCTCTCTCCCTCACTCTCTCTCCTCTTATCCACAGAAACAAAAGGGGGCC
TCTCTCTCTCTCCCTTATCCACAGAAGAAAAGGGGACCGGGCGGCGGAGGACTCGACGGCCCTCGGGAGAGGCGGCGGTGGCGGTGGGCGGCGGCTCAGC
GGCGCGTGGCGGCGGCGGTGGTGCGAAGGCGAAGCGGCGAGGTGGTGCGGCGGCGCTAGGCGGCCAGCGGTGGCGGCGGTACCCCCATCCTCCTCCCCCT
TCTCTTATTTCTCAATCTGGTGCGTGGCGGCAGTGAGGAGGGCTCGACGGCGACCGCGTCCGCGCCGGACAGCCTTCTCTTCCGTCCCCAAGCGCCCTCC
TCCTCTTCCATCCTCTTGCGGCCACCGCCGTAGCTTCCTCCTTCGGATTAATCCACTCCCAAGTACTGATCAATGTGTTTATGTGCTTAGATTTGGTTTC
AGATGTTGCAAGTCATCGATTACAAGTTTCTGATTCGGGTGTGGTCTTGTTGAAGCCCCATGATGCGTTGCCAATGGAGATTAATTGATTCTAGAAGAAG
ACCTTTGAACTTTTGTCTTGTTTTTCTTGAAGATACTAGAGATGTTTTTATTGTGATGTAGCTAGAAAATTAGAATCTTAACATTTTCCCTGAAGTGCAG
TGTCTCAAACCTTGTAGTTTCCCAGTAGTTTTTAGTTTCGTAGTTTGTTTTTCGGTTCCTATTGTAAACCTTGTAAGTTCTTCGGCTTCTTGCCATCTTT
TGAAAGGAATTAGTTTGAAATGTTTGGG