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Detailed information on CNT30371265


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697376Oryza glumipatulaOryza sativa44.7830.74100403forward

Expression of CNT30371265

Peptides detected in this lncRNA

>peptide 1 (72 aa)
KGVTRIIPETQACIYTQNFAVTKSIHRPHIQVVYRFVYTQGYCRGKTRGMYIKRSRKDSCDEIHDEPRMFSR*

>peptide 2 (63 aa)
MPSLASAASPSLVYLPSCASELALARRSSAFCVASTSDCPPDKNCTKQQSINIIDQLYFQVYS*

>peptide 3 (57 aa)
MQYSFNFVHRSQPVTVTTHWLQCPRGTSSIAVAVVRSSSSSRFTVLIGLDRISRRSS*

>peptide 4 (43 aa)
MYIYAKLCSNQIDSQATHTGSIQIRLHTRLLQRQNTRYVYQTL*

Sequence

>CNT30371265
TAAGGGGGTAACCAGAATAATTCCAGAAACACAAGCATGTATATATACGCAAAACTTTGCAGTAACCAAATCGATTCACAGGCCACACATACAGGTAGTA
TACAGATTCGTCTACACACAAGGTTATTGCAGAGGCAAAACACGAGGTATGTATATCAAACGCTCTAGAAAAGATTCATGTGATGAAATACATGATGAAC
CACGTATGTTCTCAAGGTAAAATTAATTAATGCAGTATAGTTTTAACTTTGTCCATCGATCTCAACCTGTAACTGTGACGACACACTGGCTACAGTGCCC
TCGAGGTACTAGCAGTATAGCAGTAGCTGTAGTACGTAGCAGCAGCAGCAGCAGGTTCACTGTCTTGATTGGATTGGATCGGATTAGTAGACGTAGTTCT
TGACGAACATGCCCTCCTTGGCCTCGGCGGCCTCGCCGTCGCTGGTGTACTTGCCGAGCTGCGCCAGCGAGTTGGCCTTGGCGCGGAGGAGCAGCGCGTT
CTGCGTCGCCTCCACCTCCGACTGCCCACCCGACAAGAACTGCACCAAACAACAATCAATCAATATTATCGATCAGCTCTACTTTCAGGTTTATTCTTGA
TCATCTACATCTGCAGAGACAGTTAGTAGTATCGTTGTGCAAGAAGAATCATGTCAGAATTAGCAGATCAACATTTGCAGTGGCAGTTTCTTGATCAACA
TTTCCAGTCAGGTTAAGCTTTTAACATTTGCAGCGGCAGTTTCTTGATCAACATTCCAAGTCAGGTTAAGCCATTTTGCAAGAAGTAAAGCAATATTAGT
AGCTTCCTAAGCTTTAGTTTCAGTTTCTTTATCAGTGGTAGAATGCTGACCATGATGCCGGGGACGGCAGGGGGGATCCTTCTGTGGAGGAGCTTGAGGG