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Detailed information on CNT30371181


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30103759Oryza glumipatulaOryza rufipogon20.0419.8310092forward
CNT30116518Oryza glumipatulaOryza nivara86.2762.6699.24396forward

Expression of CNT30371181

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MNCKLQMLCCRYELQAYRKGCALWAKKSH*

Sequence

>CNT30371181
AAAGGTATATTGAAGGTNTTTTTTTTTGGAATTATCAAGTATTTTTTTCAAATATAGTAGTTATCGTTACCGTTTTGGCATAGATTTTGTTCCTTAGGCT
ACCTTTTAGTTTGATCTTGAAGGTTTTGGTTCCATATACATAAATTTTGCTTATGGTTCAAAACTTTTAAGGAGATGTTGTTGTAAACTTGTAATCAGGA
AAGTGAAGCATCTAAGTTAGATGAGGATTGTTGTACCTTGGCCATGAAATGATTGAGAGAGCCCTATCCAGTTCTGTTGAGAGCCTCACAGTGTTTGATG
AATTGCAAGCTACAAATGCTTTGCTGTAGATATGAATTGCAAGCTTACAGAAAAGGTTGTGCACTGTGGGCTAAAAAGTCCCATTAACCAGGAAGCTTGA
AGGATACTAATATTAGTAATTCCACAAATGACACAATAGATATGCTACAACTTTGGCTC