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Detailed information on CNT30371127


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT000867, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30596232Oryza glumipatulaOryza meridionalis38.5557.7195520forward
CNT30106741Oryza glumipatulaOryza longistaminata69.6889.3589.26940forward

Expression of CNT30371127

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MGVQFEYFCLHYSSTLRSHGRAIWIFIHDP*

>peptide 2 (30 aa)
MFKFTTLFMFHSSGSFCLHYSSTMRHGSTI*

>peptide 3 (67 aa)
MLHIHISLHVQVHDVIHVSFFRKFLFTLFKYHASWEYNLNIFVYIIQVPCVVMGGQFGSLFMILEKR*

>peptide 4 (37 aa)
MVWIVWIISVLTFLITTCRGCSYFLGDSAEISNNFGT*

>peptide 5 (84 aa)
RRIAPVALAAAPPELCRRRCFSCLRRRRRWCSRRRSPQPSSSTAGRWKEGEKAETNRKEGKKGKFDRRREIWGIWCGGFQRWRS*

Sequence

>CNT30371127
CAGGAGAATCGCCCCTGTAGCCCTAGCCGCCGCACCTCCTGAGCTCTGCCGCCGCCGCTGCTTTTCCTGTCTTCGCCGGCGCCGCCGCTGGTGCAGCCGT
CGCCGGTCGCCACAGCCGTCGTCGTCCACAGCCGGTCGTTGGAAGGAGGGAGAGAAGGCAGAGACGAACAGGAAGGAAGGAAAGAAGGGGAAATTTGATA
GAAGAAGGGAAATTTGGGGGATTTGGTGTGGAGGGTTCCAACGTTGGAGGAGTTGAGTCAGATTATCGAAGGAGTTAAGGCAAGTACAAGATGGACTTGT
GTGTTGGATAAACTGTGTTGCTTTGTTGGTTTCATTTACCCAATTCTTATTCGAAGCTTCCTAGTATCAATTGTGTGGTTTTGATATTATGCTACATATT
CATATTTCACTTCATGTTCAAGTTCACGACGTTATTCATGTTTCATTCTTCCGGAAGTTTTTGTTTACATTATTCAAGTACCATGCGTCATGGGAGTACA
ATTTGAATATTTTTGTTTACATTATTCAAGTACCCTGCGTAGTCATGGGAGGGCAATTTGGATCTTTATTCATGATCCTTGAGAAGCGCTGATCACGCTT
GCTCGGCTTATCGGTAATGCTAAGAGGATATTCATATCTACCCGGGAGGGAACTACTATCTTTTGACTTCTTTGGTTTTAAATAAAGTAAATCGAACCCT
TCATATTGGTTTCTTATTGCTTAAATCCTGTGTATGTTTTACTAGTTCAATATTGTACTTGCTGAGTACTTTTTACTCACTCTTGTGTTTAATTTGGTTT
TTAGGTACCTAATGACATTGATCGGCATGGGGCGGGAGTAGCACCCTTGGACTACACATTATTATTGCACACAACTGAAATTTAGTTTTAGACTATTTTT
TTGCTCAGCATAAGTTTTGCATAGAACTTGTAAAGGTCATTTAAGGTTCTGATCCTTATTTTTCACGTGGGATTTGTGGAGCTAGGATGGTTTGGATTGT
GTGGATTATATCGGTATTGACCTTTCTTATCACTACCTGTCGTGGATGTTCGTATTTTTTGGGAGACTCTGCCGAAATTTCTAATAATTTTGGGACTTAA
GTTTTTGAGTGTATTTTGGTATGGCATTCTAGGTACGTGGTTACCTGGGGTGTTACAGGGCAGGCTTCACTCAAGGTGGAAAAAAAAATGAAAACAGTAA
ATGTGTATTAATAATGAAAAATTGGATCCCCTATTACACACCCCTCGGGGTCTTTTTATAGTTTTACGACCCTAGAATTTGGAGTGCTAGTGAATTTATA
TGATTGTCTCTTTGATGGAACAATTATGAGGGAAACTGTAAATAACGTG