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Detailed information on CNT30371082


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT000867, E-value = 6e-117

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30109742Oryza glumipatulaOryza longistaminata72.0327.4490.61394forward
CNT30100403Oryza glumipatulaOryza rufipogon72.2131.694.43395forward

Expression of CNT30371082

Peptides detected in this lncRNA

>peptide 1 (75 aa)
KKQTKKNPVALTAAPPALCRRRCCSCLRRCRRRRRRFSRHRPSPPHPLVSLMFCLHYSRTMRSHGSAIWVFIHDP*

>peptide 2 (62 aa)
KKTNEKKSCSPNRSTSCALPPPLLFLSPPVPPPPPSVQPSSSFTTPSARLLDVLFTLFKNHA*

Sequence

>CNT30371082
AAAAAAACAAACGAAAAAAAATCCTGTAGCCCTAACCGCAGCACCTCCTGCGCTCTGCCGCCGCCGCTGCTGTTCCTGTCTCCGCCGGTGCCGCCGCCGC
CGCCGTCGGTTCAGCCGTCATCGTCCTTCACCACCCCATCCGCTCGTCTCCTTGATGTTCTGTTTACATTATTCAAGAACCATGCGTAGTCATGGGAGTG
CAATTTGGGTCTTTATTCATGATCCTTGAGAAGCGCTGATCACGCTTGCTCGGCTTACCGGTACCTAATGACATTGATCGGCATGGGGTGGGAGTAGCAC
CCTTGGACTACACATTATTATTGTACACTACTGAAATATAGTTTTAGACTATATTTTTTCTCAGCATAAGTTTTGCATAGAACTTGTAAAGGTCATTTAA
GGTTCTGGTCCTTATTTTTATGTGAGATTTGTGGAGCTAGGATGGTTTGGATTGTGTGGATTATATCGATATTGACTTTTCTTATAACTGCCTGTCGTGG
ATGTCCGTATTTTTAGGGGAGACTCTGCTGAAATTTCTAATAATTTT