Detailed information on CNT30371058


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696223Oryza glumipatulaOryza sativa66.9939.04100349forward
CNT30554896Oryza glumipatulaOryza glaberrima100.3854.7698.47523forward
CNT30108137Oryza glumipatulaOryza longistaminata100.3866.2998.66523forward
CNT30103478Oryza glumipatulaOryza rufipogon100.3853.8199.04523forward
CNT30117552Oryza glumipatulaOryza nivara98.8554.0499.03515forward

Expression of CNT30371058

Peptides detected in this lncRNA

>peptide 1 (58 aa)
FKALINPSMPQYKQFRLHIYTIHSQKWLYFGIGSICFRSNRDEKSANQNNTTDKYLDH*

Sequence

>CNT30371058
TTTAAAGCACTAATTAATCCTTCCATGCCACAATATAAACAATTTAGACTACATATTTACACTATACATAGCCAGAAATGGTTATATTTTGGGATCGGGA
GTATTTGTTTCCGATCTAATAGAGATGAGAAATCCGCTAATCAGAATAACACCACAGATAAGTACCTAGACCATTAGTTGGGAAACGAATAAAATCATTA
TTGCAAAAACATCATCTTCTTCTTCATCTTCTTAGTGTACACAACACCAACTCGATCATCATCTCGTCGCACTAAACCCATCTTCCCCAACCCAAAGACA
ACGAACTCGCTGGCCACAAATCCATCCAACCACAATTAACCACTGCTAAGCTACGGTCCCCCACTTCACTTGCCGGGGACGAAGTTGGTGGCGTACGCCC
AGGCGTTGTTGTTGACGGGGTCGGCGAGGATGCTCTGCGCGTGGATCAGGCTCGGGTTGCCGAGGTAGTCGAGCCCGCCCTCGCTGAAGATCTGCGAGCC
CGCCTTGAACCACACGGCCTC