Detailed information on CNT3037105


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9FJF6|SAU23_ARATH, E-value = 5e-29

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3071844Cucumis meloQuercus suber63.331.8179.79188forward
CNT3048978Cucumis meloCucumis sativus29.6325.3689.7788reverse complement

Expression of CNT3037105

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MVSIFHEICNLEVTSMKASSLQGMVKPPVGWLNPNSSSALLSKCTNEG*

>peptide 2 (34 aa)
MQSRSDINEGFFFAGNGQTSCWMAESKLFFSSTK*

Sequence

>CNT3037105
CAAAGTTTCCGTTGACAGTGATATTCAATTCTATCTAATATAAACAAAATTGAAAAGAAAAGTTGTCAAAACTGTCAAGAGAATATTCTCTATGGTCTCA
ATCTTTCATGAAATATGCAATCTAGAAGTGACATCAATGAAGGCTTCTTCTTTGCAGGGAATGGTCAAACCTCCTGTTGGATGGCTGAATCCAAACTCTT
CTTCAGCTCTACTAAGTAAATGCACAAATGAAGGATGATTCAAGTAAGAAATAGGAACCAAAAACCGCTTTCTTTGGTTTTCGCCAACATATACCGG