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Detailed information on CNT30370984


BLAST search results

BLAST vs Swiss-Prot:
sp|P12330|CB21_ORYSJ, E-value = 2e-67

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695953Oryza glumipatulaOryza sativa74.4368.3299.66591forward
CNT30589825Oryza glumipatulaMusa acuminata43.4566.0987.54345forward
CNT30103295Oryza glumipatulaOryza rufipogon100.2565.4699.12796forward
CNT30577620Oryza glumipatulaOryza barthii66.2510098.29526forward
CNT30117513Oryza glumipatulaOryza nivara100.2565.5798.99796forward

Expression of CNT30370984

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MRYPSTAPMSTTCTAQMARMLCAWIRLGLPR*

>peptide 2 (88 aa)
FLRPNALNFNPLNQRIHYLPRFDPIYCIRKFKALINPSMPQYKQFRLHIYTIHSQKWLYFGIGSICFRSNRDEKSANQNNTTDKYLDH*

Sequence

>CNT30370984
TTTTTAAGACCAAACGCTTTGAATTTTAACCCACTAAATCAGAGGATCCATTATCTTCCTAGATTCGACCCAATCTATTGTATACGTAAATTTAAAGCAC
TAATTAATCCTTCCATGCCACAATATAAACAATTTAGACTACATATTTACACTATACATAGCCAGAAATGGTTATATTTTGGGATCGGGAGTATTTGTTT
CCGATCTAATAGAGATGAGAAATCCGCTAATCAGAATAACACCACAGATAAGTACCTAGACCATTAGTTGGGAAACGAATAAAATCATTATTGCAAAAAC
ATCATCTTCTTCTTCATCTTCTTAGTGTACACAACACCAACTCGATCATCATCTCGTCGCACTAAACCCATCTTCCCCAACCCAAAGACAACGAACTCGC
TGGCCACAAATCCATCCAACCACAATTAACCACTGCTAAGCTACGGTCCCCCACTTCACTTGCCGGGGACGAAGTTGGTGGCGTACGCCCAGGCGTTGTT
GTTGACGGGGTCGGCGAGGCGGCCGTTCTTGATCTCCTTCACCTTGAGCTCCGCGAACGCCTCGGGGTCGTCGGCGAGGCCGAGCGGGTCGAAGGCGCCG
CCGGGGTAGAGCGGGTCGACGACCTCGCCGAGCGGCCCGCCGGCGATGCGGTACCCCTCGACGGCGCCCATGAGCACCACCTGCACCGCCCAGATGGCGA
GGATGCTCTGCGCGTGGATCAGGCTCGGGTTGCCGAGGTAGTCGAGCCCGCCCTCGCTGAAGATCTGCGAGCCCGCCTTGAACCACACGGCCTC