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Detailed information on CNT30370923


BLAST search results

BLAST vs Swiss-Prot:
sp|P36213|PSAD_HORVU, E-value = 1e-100

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695521Oryza glumipatulaOryza sativa65.672.1999.82553forward
CNT30554655Oryza glumipatulaOryza glaberrima78.1775.3199.39659forward
CNT30577354Oryza glumipatulaOryza barthii87.3189.5496.47736forward
CNT30117441Oryza glumipatulaOryza nivara77.9478.0399.54657forward

Expression of CNT30370923

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MSKTFLPVNLTSMGLTFLPMLRKFWPTPCLPALTFSG*

>peptide 2 (31 aa)
MNTHQNSPNIYYNIIRRDYIPPSIDYTIINN*

Sequence

>CNT30370923
AAAAGTTGGAAAATTAATTTAACTTGCAGCAACTAATTATGATGAATTACGATTGTTTGATCATGTGAATTAATTCACAATAATTAACACGTTAATGAAC
ACGCATCAAAATTCACCAAACATATACTACAATATTATAAGAAGAGATTATATCCCACCATCGATCGATTACACCATCATCAATAACTGAAGAGCAGCCT
GACAGATGATTAAAATTACATGTCCATCCACCCAAAACACAAGTAATTAATAGGTCGATTATGAGAGAAGAAGAAGAAGAAGTCTAGATGTCGAAGACGT
TCTTGCCGGTGAACTTGACCTCGATGGGGCTGACGTTCTTGCCGATGCTGCGGAAGTTCTGGCCGACGCCCTGCCTGCCGGCGTTGACCTTCTCCGGGTA
GACGCCGTCCTTGGGGTGGAGGTACTGCACCTCGCCATTGGGGAAGACGCGGTAGAACTGGTAGTTGATCTTGTACTTGGAGCGGAGCCTGGTGCCCAGG
GCCAGGCACTGCTCCTTCCTGGCCAGCTTCAGCAGGTTGGGGCCCTCGCGCATGATGGCGGCGCCGCCCGTGGGCATCTCGAACACCTGCTCCTTGGGCG
ACGTCCATGTGATGACGTAGAACTCCTCCACCTGCGCCTTCCGGAGGAGTCCCCCCGTGCTCCCGCCGAAGATCGGGGACGGCGTGTTGGGGTCCAGCTG
CGGCGGCACGAACCCCGCGGGGGCTGGCTTCTTCTCCTCCGTGGCACTTGGCGGCGGAGGCTTGCGTGGCCATGGCCATGGTGGTCGGAGGAGGAGAGAG
GAGGGTACCGTGTGGCGGATTCGATTCGAGTGGTGTGGTGTGG