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Detailed information on CNT30370899


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT005030, E-value = 1e-106

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3067785Oryza glumipatulaLeersia perrieri48.59.2285.84113forward
CNT30596657Oryza glumipatulaOryza meridionalis51.9322.1684.3121forward
CNT30551818Oryza glumipatulaOryza brachyantha94.4250.1186.82220reverse complement

Expression of CNT30370899

Peptides detected in this lncRNA

>peptide 1 (33 aa)
VMSYASCVVIALPRTARAMSDLLQLGSCPVGLP*

Sequence

>CNT30370899
GGTTATGAGTTATGCTTCTTGTGTGGTCATTGCTCTGCCGAGGACGGCGAGGGCAATGAGTGATCTCTTGCAGCTTGGCTCTTGCCCGGTTGGTTTGCCC
TAGTGGGGTTGTGGCACCACCGGTTTTATCTTTTGCTTATGAACTCTATTTGAGACTTCCGTTACTATATTTATGTGTTCTATGTTGGGACCTCGGACCC
TATTATGTGTCATGTACCTCGCTGCACTTTAAC