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Detailed information on CNT30370881


BLAST search results

BLAST vs Swiss-Prot:
sp|P36213|PSAD_HORVU, E-value = 8e-86

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30570681Oryza glumipatulaVitis vinifera20.111.3485.81155forward

Expression of CNT30370881

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MAMVVGGGERRVPCGGFDSSGVVWRREISEME*

>peptide 2 (37 aa)
MSKTFLPVNLTSMGLTFLPMLRKFWPTPCLPALTFSG*

>peptide 3 (35 aa)
INTLMNTHQNSPNIYYNIIRRDYIPPSIDYTIINN*

Sequence

>CNT30370881
AATTAACACGTTAATGAACACGCATCAAAATTCACCAAACATATACTACAATATTATAAGAAGAGATTATATCCCACCATCGATCGATTACACCATCATC
AATAACTGAAGAGCAGCCTGACAGATGATTAAAATTACATGTCCATCCACCCAAAACACAAGTAATTAATAGGTCGATTATGAGAGAAGAAGAAGAAGAA
GTCTAGATGTCGAAGACGTTCTTGCCGGTGAACTTGACCTCGATGGGGCTGACGTTCTTGCCGATGCTGCGGAAGTTCTGGCCGACGCCCTGCCTGCCGG
CGTTGACCTTCTCCGGGTAGACGCCGTCCTTGGGGTGGAGGTACTGCACCTCGCCATTGGGGAAGACGCGGTAGAACTGGTAGTTGATCTTGTACTTGGA
GCGGAGCCTGGTGCCCAGGGCCAGGCACTGCTCCTTCCTGGCCAGCTTCAGCAGGTTGGGGCCCTCGCGCATGATGGCGGCGCCGCCCGTGGGCATCTCG
AACACCTGCTCCTTGGGCGACGTCCATGTGATGACGTAGAACTCCTCCACCTGCGCCTTCCGGAGGAGTCCCCCCGTGCTCCCGCCGAAGATCGGGGACG
GCGTGGCACTTGGCGGCGGAGGCTTGCGTGGCCATGGCCATGGTGGTCGGAGGAGGAGAGAGGAGGGTACCGTGTGGCGGATTCGATTCGAGTGGTGTGG
TGTGGAGGAGAGAGATATCGGAGATGGAGTAGAGAAAAGCCCAAGAAGAAGAGAGGGGAAATGGGTGAGGA