Detailed information on CNT30370879


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697161Oryza glumipatulaOryza sativa88.3110099.02204reverse complement
CNT3089385Oryza glumipatulaVigna radiata27.2717.990.4863forward
CNT30143656Oryza glumipatulaMedicago truncatula25.975.429060forward
CNT30256205Oryza glumipatulaAvena sativa50.229.383.62116reverse complement
CNT3015666Oryza glumipatulaZea mays46.753.4288.89108reverse complement
CNT30349956Oryza glumipatulaEragrostis tef69.762.1693.17161reverse complement
CNT30646316Oryza glumipatulaCannabis sativa32.919.9586.8476forward
CNT30319789Oryza glumipatulaAsparagus officinalis56.7162.9883.21131forward
CNT30147808Oryza glumipatulaBrachypodium distachyon41.136.3385.2695forward
CNT30103646Oryza glumipatulaOryza rufipogon10029.8498.7231reverse complement
CNT30575034Oryza glumipatulaOryza barthii96.5449.2399.1223reverse complement
CNT30496834Oryza glumipatulaDigitaria exilis32.472.2486.6775reverse complement
CNT30174954Oryza glumipatulaVigna angularis27.2724.6192.0663forward

Expression of CNT30370879

Peptides detected in this lncRNA

>peptide 1 (75 aa)
VRSRLPPGRARLHLIAFIGHRLPSQTNTCLFCTLCPHSCAPGKNFPVGHPSQIAPGQARLTLEFFGDWLPEKKLQL

>peptide 2 (48 aa)
MSFLHTLSSLVCTREEFPGRSPIPNCSRPSTLNPGVLWRLASGKEVATC

Sequence

>CNT30370879
TGTAAGGTCCCGCCTTCCCCCAGGCCGGGCCCGCTTACATCTGATAGCTTTCATAGGTCATAGACTGCCCTCACAGACCAACACATGTCTTTTCTGCACA
CTTTGTCCTCACTCGTGTGCACCCGGGAAGAATTTCCCGGTCGGTCACCCATCCCAAATTGCTCCAGGCCAAGCACGCTTAACCCTGGAGTTCTTTGGAG
ATTGGCTTCCGGAAAAGAAGTTGCAACTTGT