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Detailed information on CNT30370810


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695706Oryza glumipatulaOryza sativa98.5797.0198551forward
CNT3099738Oryza glumipatulaOryza rufipogon97.6762.4796.7546forward
CNT30574622Oryza glumipatulaOryza barthii79.9661.7497.09447forward
CNT30551241Oryza glumipatulaOryza brachyantha99.1199.6483.21554forward

Expression of CNT30370810

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MHGELREIEIGEESGGFSLHGCSSNMTLFPSIC*

Sequence

>CNT30370810
TTCTTTTCTTCCTCAAGCTGAGCTCTCATCCCACTTCTCCTCCCCAAATCCCATCCAATAGCCCAAGATCAATCCCTACATGTTAGATCACAACAATCCC
CATCATCCAAGCTTTCTATCCATCCCAACATCTTGCACATGCATGGAGAGTTGAGAGAGATCGAAATAGGAGAAGAGAGTGGTGGTTTCAGCCTGCATGG
TTGCAGCAGCAACATGACTTTGTTTCCCTCCATTTGCTAGGAGGTGGCTGCAGCTCATCCGGTGTTAAACTCTTTTGATTTCGGTTGAAGCAGCCCTAGG
CAACGTCTCTTACCGTCAGCCCGAGGCCTTGCTCCATCTCTTGCCATCAGCCCGAGGCCTTAGCCTCGCACGACCCTACGACCAGGTTGCTGCCATGTGA
GCGAAGTCCGGTGGAAGTTGGAGAAAAGGGGGAGTGAAAATAGAAATCGATTTCTGAGATAGCTTTTGAGCTGAAAGAGATTCGGAGATTCCGGAGAGTA
ACGAGCCATATCCCGAGGAGGATAGTGACTACCCTCAGCAGCAAGGCAAGCACCTAAGC