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Detailed information on CNT30370799


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONOSAT000269, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697923Oryza glumipatulaOryza sativa100.9350.7388.96761forward
CNT30552893Oryza glumipatulaOryza glaberrima101.0629.0185.96762forward
CNT30596220Oryza glumipatulaOryza meridionalis19.522.4885.71147forward
CNT30110898Oryza glumipatulaOryza longistaminata100.9355.3989.62761forward
CNT30103930Oryza glumipatulaOryza rufipogon97.3531.2386.65734forward
CNT30577378Oryza glumipatulaOryza barthii95.0930.3688.7717forward
CNT30117501Oryza glumipatulaOryza nivara56.3712.8696.94425forward
CNT30550978Oryza glumipatulaOryza brachyantha24.85.4483.42187forward

Expression of CNT30370799

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MLLEPLPERRESGRPQKTMTTQWREAILGITMDG

Sequence

>CNT30370799
TTTTCGACCGGGGCGGACGGAGGATATGGGTGGTATCCGGGAAAGGCTAGTACCGTCCCCGGTCAATTAAGGACCGAGCCATGAAGTTAAGCATGAAACG
ACCCCCGTACAACCGCACTTCTCGTATGGGTATAGACCTAGCGGAGTAGATAGCTGAGCGGACGCAGTATCCATGCATAGTGGTTTCTTGATGTGTGAGG
CAGGGGCTCTACGGTGGGGCAGCCATTGGTAGGACCGCGAGGCGGGTGTCTATAGTGGTATTGCCATCGGTAGGACTGCCATGTGAGAATCTAAACATAA
TTATAACTTAATGCATGTGTGAGTCTTTCCTTCCCGGGTGCGCCAGAACTCCTCTCACTGCTAGAAACCGTGTACGCCTAGAGTGCATGAGGATGTAAAG
TTCATGGAGCGGGTACTGCCAATGCGAGGTTATCGAAAAGCTTTTCCGTGACGCGTCTCATGTGTTGGGACGAGGCTCATGTGTTGGGCAGTCGCGGAGT
GCGGGTAAAGTGTACATCCACTGCAGTGTGAGTAAACCAAATCTATTCGAATAGCCATGCTCACGGTTATTGAGCACCGGGACGTGTATTACACTTGGGT
AGACTCTAAATTCTTAACTTGTGTGGGATGGGATATTGCATGATGATTTTATGCTGTTGGAGCCACTTCCTGAGAGGAGGGAAAGTGGACGTCCTCAGAA
AACCATGACGACTCAATGGCGGGAAGCTATCCTTGGGATCACAATGGATGGTGG