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Detailed information on CNT30370769


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30596559Oryza glumipatulaOryza meridionalis29.6922.4199.06106forward
CNT30102387Oryza glumipatulaOryza rufipogon48.1824.5497.67172forward

Expression of CNT30370769

Peptides detected in this lncRNA

>peptide 1 (74 aa)
NSKLISNKLKNKQASKKGKRKHSEGARATMPRALDYKKTPSILAMRSMQQALITGQPHTHDNTLTDKHTHSTQA*

>peptide 2 (47 aa)
MTTLSQTNIHIPHKHKTRTYSCHTARSRRHTYYVRYVLCCRACKSWQ*

Sequence

>CNT30370769
CGAATAGTAAGCTGATATCCAACAAACTCAAAAACAAGCAGGCCTCAAAGAAAGGAAAACGAAAACACAGTGAGGGAGCGCGCGCAACGATGCCGCGCGC
GTTGGATTATAAAAAAACCCCAAGTATATTAGCCATGCGATCAATGCAACAAGCACTAATAACCGGCCAACCACACACACATGACAACACTCTCACAGAC
AAACATACACATTCCACACAAGCATAAGACAAGAACATACAGTTGTCATACAGCTAGGAGTAGGAGGCACACATATTACGTACGTTATGTCCTTTGTTGC
AGAGCCTGCAAATCTTGGCAGTAAAACAGTAGCAAACTTATTAGCAGTTAGCCGGCA