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Detailed information on CNT30370630


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30596646Oryza glumipatulaOryza meridionalis100.6144.7896.36330forward
CNT30102506Oryza glumipatulaOryza rufipogon100.6151.2497.58330forward
CNT30576982Oryza glumipatulaOryza barthii100.6149.0397.58330forward

Expression of CNT30370630

Peptides detected in this lncRNA

>peptide 1 (30 aa)
REWRGKQDELHQISESYGPSSTYITHCFIS*

>peptide 2 (74 aa)
ESGGESKMSCIRFLNHMAPPPLTSPTASSHSNHWLAKGHTPTQTRGRTDTIDCHTPIDRTNEHGLISVADRSNY*

Sequence

>CNT30370630
AAGAGAGTGGAGGGGAAAGCAAGATGAGTTGCATCAGATTTCTGAATCATATGGCCCCTCCTCCACTTACATCACCCACTGCTTCATCTCATAGCAATCA
CTGGCTCGCAAAAGGACACACACCGACACAAACTCGAGGACGGACGGACACCATTGACTGCCATACTCCGATCGATCGAACGAACGAACACGGTCTTATT
TCGGTAGCAGATCGATCAAATTATTAGCTAGAGTAGAAGCAGAGCAGACGCGACGACGATGGCAATGCAATGCAGCTCCCCCTCCCCGGAATCTCTGCAG
ATGCAAAGAAGCAGCAATCCAAGTGTCA