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Detailed information on CNT30370505


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673713Oryza glumipatulaSetaria viridis17.8820.1310096forward
CNT30352270Oryza glumipatulaEragrostis tef17.8829.6395.8396forward
CNT30583094Oryza glumipatulaEchinochloa crusgalli17.1345.7798.9192forward
CNT30117062Oryza glumipatulaOryza nivara25.5159.57100137forward

Expression of CNT30370505

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MAKWVIRTRCWQRGRGRRTCRRTGRRGWR*

Sequence

>CNT30370505
GGAGGCTACAAACAAACTGAAATGACATGGCCCGAATCAAATGAAATCTCACAATGAAACTCAACAGAAGTGTTCGATCTTAAACATGCATCTCATCCAA
CTTGCTCCACACTGATCACATTACAAATTAATCAAGAAGAAACTAAACATGGATCGATCATCACCCAAGTGTCACATCCTCGCAACAAAAGCCTTCTTCC
CCATCTGAACCAAATCAATCCTTCACAACACATCCTCACAAGATTCTGACGATGGAGTGACCACCATTTTTATGCGTGTTGCCGATGGCGAAATGGGTAA
TTAGAACTCGCTGCTGGCAACGGGGGCGTGGTCGCCGCACATGTAGACGTACCGGTAGACGAGGGTGGAGATGAACTCGGCGACGTAGGCCTTGAGGGAG
GCCGCGCTGAAGGAGTCATCGAAGCGGCCGAAGGCGATGTTGCCCGACATGGCGACGACGGTGGCGCGCGCGGGGGAGAGCTGAGTGAGCAGAGGAAGAG
GAAGGAGAGGATGTGATATGGGGGGTGGTCACTAAGA