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Detailed information on CNT30370393


BLAST search results

BLAST vs Swiss-Prot:
sp|A2YH64|CATA2_ORYSI, E-value = 3e-46

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673657Oryza glumipatulaSetaria viridis31.4930.7194.5974forward
CNT30640164Oryza glumipatulaNymphaea colorata30.213.4887.3271forward
CNT30516671Oryza glumipatulaJuglans regia47.6623.9387.5112forward
CNT3021611Oryza glumipatulaCitrullus lanatus47.6628.2187.5112forward
CNT30708944Oryza glumipatulaGlycine max38.7215.9983.5291forward
CNT3046375Oryza glumipatulaPrunus dulcis47.6616.0585.71112forward
CNT30168584Oryza glumipatulaPistacia vera40.4335.0683.1695forward
CNT30305192Oryza glumipatulaTriticum aestivum55.3223.9989.23130forward
CNT3085325Oryza glumipatulaVigna radiata41.2813.7283.5197forward
CNT30668770Oryza glumipatulaTriticum dicoccoides55.3216.9790130forward
CNT30263082Oryza glumipatulaBrassica rapa28.512085.0767forward
CNT30475173Oryza glumipatulaSaccharum spontaneum55.3217.590.77130forward
CNT308572Oryza glumipatulaZea mays27.6622.4186.1565forward
CNT30654455Oryza glumipatulaRosa chinensis47.6624.5189.29112forward
CNT30688530Oryza glumipatulaTriticum urartu52.3429.0189.43123forward
CNT30368538Oryza glumipatulaSorghum bicolor52.3420.591.87123forward
CNT30154060Oryza glumipatulaPrunus persica47.6611.1684.82112forward
CNT30704835Oryza glumipatulaPrunus avium47.6637.4683.93112forward
CNT3022395Oryza glumipatulaPopulus trichocarpa51.4929.4485.12121forward
CNT3038372Oryza glumipatulaCucumis melo47.6610.1885.71112forward
CNT30576697Oryza glumipatulaOryza barthii55.3229.95100130forward
CNT3050211Oryza glumipatulaCucumis sativus47.6629.7985.71112forward

Expression of CNT30370393

Peptides detected in this lncRNA

>peptide 1 (50 aa)
NWLQGDDILWPCLGDIKRIEVKSVLMIRINSLDVKLPVEFDKVRLSILID*

Sequence

>CNT30370393
CAACTGGCTGCAGGGGGATGATATCCTCTGGCCATGTCTTGGTGACATCAAGAGGATCGAAGTCAAATCTGTCCTCATGATCAGGATCAATAGTCTGGAT
GTAAAGCTTCCAGTGGAATTTGACAAGGTGAGGCTTTCCATCCTTATTGATTAGGGTGTAGGTGTTGACACCAAAACCCTCCATGTGCCTGTAGTTGAGT
GGGATGCCTACATCGTCAAAGAGGAAGGAGAACAT