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Detailed information on CNT30370373


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30116751Oryza glumipatulaOryza nivara69.1946.65100265forward

Expression of CNT30370373

Peptides detected in this lncRNA

>peptide 1 (61 aa)
RVIMHAIFSFFTLPHECRDAKSRGDRKLKPNTWDRSTSHAASNWILYNLYSHRNSTIISTS*

>peptide 2 (37 aa)
MQHRIGSFTTYIAIGIVQLYQHHKQGELIHGDPAMGD*

>peptide 3 (33 aa)
MAIRPWGTSSTVQRICMDGSDQEEGEAETRNLI*

>peptide 4 (34 aa)
MSRCKIEGRQKIKTEHMGSQYVACSIELDPLQLI*

Sequence

>CNT30370373
GCCGGGTAATCATGCACGCCATTTTCAGTTTTTTCACACTACCACATGAATGTCGAGATGCAAAATCGAGGGGAGACAGAAAATTAAAACCGAACACATG
GGATCGCAGTACGTCGCATGCAGCATCGAATTGGATCCTTTACAACTTATATAGCCATAGGAATAGTACAATTATATCAACATCATAAACAGGGGGAATT
AATCCATGGCGATCCGGCCATGGGGGACTAGCAGTACAGTACAGAGGATTTGCATGGATGGATCGGATCAAGAAGAAGGTGAGGCAGAGACGAGGAATTT
AATTTAGATCTTGCCGCGTGGGCCGGGCGTCGAAGTAGACGCTCTTCTCGCCGTACTTGGCCACCACGGCGGCGCGCGGCCTG