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Detailed information on CNT30370314


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30553677Oryza glumipatulaOryza glaberrima70.2428.2598.59354reverse complement

Expression of CNT30370314

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MSGALSSTNTSTGRYLNPLPFIYNVVHQPNRDNPTRSKPR*

>peptide 2 (34 aa)
MSFINPIETTRLDLNLGDPTENSNRFYCSFFYFS*

Sequence

>CNT30370314
TTCGTCGCCGCCGCCGCTCCACCCCACAAACCCTAAACCGATCTCGAGGGGGGCGTAGCCAGTGACGGGAAGTCCACCGCCGCGCCACGCCTCGTCGTCG
ACACCATCGCTGCCGCAACCGCGTCACTGCCTGCGACCGCCGCTGCATCACCGCCATCGGCACCAAGCACACCGTCGCCGCCGTCCACGTCGAGCCGCAA
CGACAGCGACGATGTCCGGCGCCCTTTCCTCCACGAACACCTCAACCGGTCGGTATCTAAACCCTCTCCCTTTCATCTACAATGTCGTTCATCAACCCAA
TAGAGACAACCCGACTAGATCTAAACCTAGGTGATCCAACAGAGAACTCTAACAGGTTCTATTGTAGTTTTTTTTATTTTTCTTAAATTAATTGTGAAGG
TGGAAAGATTTTAGGTCCGATTTTTCTTATAAGCTGATATGAACTCTCTTTTCGGTCCGATCAAATTAATTAATATAGGGTGTGAAGGTATGATAAGCGC
TGAT