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Detailed information on CNT30370291


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30107966Oryza glumipatulaOryza longistaminata100.29100.1494.86700forward
CNT30577841Oryza glumipatulaOryza barthii9.7426.1586.7668forward

Expression of CNT30370291

Peptides detected in this lncRNA

>peptide 1 (31 aa)
QHHRNSHEDERHHRQQGEAMRELGIGSASQA*

Sequence

>CNT30370291
CCCAGCACCACCGCAACTCGCATGAGGACGAGCGTCATCACCGACAGCAGGGGGAGGCAATGCGGGAGCTAGGGATCGGATCGGCTTCCCAAGCCTAGGA
GGCTCCGGATCTGGTCGCGCCACCCCCGAGGGTGCTGTCCCCTCCTCCTCCCTGCCTTCCCGCTACCCTGTGTTCTTCCACCCACAATCACCAATGTTCT
CTTCCTCTAGCCAAAGGGCAGCTAAGTGCTCTTGGTGATCTAGGAGGCTGTCCACCAAGCCATAGCACCTAACCTTTTCCCATGGCGGCAGCTTGACCCG
CTGATTGTGAGGCTGTGTGACAAACTGACAATGGTGGTTTGCCGCGATTGCAAGGATCAATTCATCGAACAACGGTTTTGGTGATCGGGACCAAAATATG
TCCAAAGGTGGCTGGATCAGTTTGAATTTTGTGAGCTCAAGCTCCTCTGGGAGGATTTAAGCCAAGGAGTACGTTAGGAGGCTTTGGCCTATGCGTATAT
GTAACCTGATATGTGTGCATTAGGAGGACTGTGGCCTATGGGTGTATGTGAACTGTGATATATGTGAAGCTATTTTGATGTATGTATGTTTTCAAGTTCT
TGGGTTGGGGGTTAAATAATGTGATATTAAGTTTTTTTGTTGTCAACGTTCTTAATGTCCATGAATAAAGGGGAGATTATGCGAAACTTTTAATAAAT