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Detailed information on CNT30370236


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30291823Oryza glumipatulaTriticum aestivum5.5729.0587.2186forward
CNT30130494Oryza glumipatulaLolium perenne14.6922.2385.46227forward
CNT30367653Oryza glumipatulaSorghum bicolor10.8722.9883.93168forward
CNT30149046Oryza glumipatulaBrachypodium distachyon12.1763.387.23188forward
CNT30576261Oryza glumipatulaOryza barthii57.6788.1399.55891forward

Expression of CNT30370236

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MVFSKVFFFGKLNQLNHRIKNLTIFEVPQQLLL*

>peptide 2 (33 aa)
MISMTRPCMGPIPEPRVCTGVACIAHYDSLVRL*

>peptide 3 (42 aa)
DRAGFIDAPEKLPPAMVLAPTMRPVSSGPKPGTELRGSRMVA*

>peptide 4 (53 aa)
MLEKNRKPDGDVAFNLYLFSTGVNLLYLGVMNLLMYLCGLTGKYDQVTWSRLC*

Sequence

>CNT30370236
TGACCGGGCCGGGTTCATTGACGCGCCGGAGAAGTTGCCACCAGCGATGGTGTTGGCACCGACGATGAGGCCCGTGAGCAGCGGGCCGAAGCCTGGGACC
GAGCTCCGCGGGTCAAGGATGGTCGCGTAGACGACGAATAGGAGGGAGAAGGTTAGGATGATCTCCATGACCAGGCCCTGCATGGGCCCTATCCCTGAGC
CCAGAGTGTGCACCGGGGTCGCCTGCATTGCACATTACGACAGTTTGGTTAGATTGTGAGGAAGATACCTATCGTGTTCAGCTTATACATGAATACAAGA
TGCTTGAAAAGAACAGAAAACCAGATGGTGATGTGGCCTTTAATTTATACTTATTTAGCACAGGTGTGAACTTGTTATACTTAGGAGTGATGAATTTGCT
TATGTATCTATGTGGACTAACCGGAAAGTACGATCAAGTGACTTGGTCTCGCCTATGTTAGTCTTCAACTTGTATTTTTAAACCAGCTATTCCAATTCCC
AAGGGTCAGTGTTGCTAACAGCGTGTTTAACTTGGCTAACTTGTACTAACTTTGTGATACATATGCTTTACAAACCAAGACTCTAGAGGGTTTTTGAGAC
TTCAGGCACTAAAGCAGAATACAAACCTGGAAGTTCATCAGAGTCACTAACAGCATAATGATTCATATCTTATACGACTTTGGTTGAAGCAATCGGCAGT
TGTTATCCAAATAAGAAAACAAAACTATAGATTGAACTAGAATTCTCACAGTTCTGAATCACAAAACTGATTTAAAAAGGCTTGTAACTAATGGTTTTCA
GCAAAGTCTTTTTTTTTGGTAAACTGAACCAACTGAATCACAGGATTAAAAACCTGACAATCTTTGAAGTTCCTCAACAATTACTACTATAAAACCTTAA
ACCCACAGAAGTTTATCAGGTGAATTATTAGTAAATTAACCCAGCATCACATCTGGTCCCAAAAAAAGCTAACAAAAACAAATTTAGAAGTTGATGGCCA
CGGACAAATCGAGAGAACGACACGATTCCACCCCCAAATAAAAAAAATTTCCTCCTCTTTTCACGGATCCTAATTTTGACAGGCAAAGAAAGAAAGAAAG
AATTAACGGCGGTGACGGGTTGGGTGCTTACCATGCCGCCGGTGAGGTAGCGGAGGAGGATGCAGGCGAGGGAGGAAGCCAGCAGCTGGGCGGCGACGTA
GAGCGCCGACCTGAACGCCGTGATGTGCCCCCGCGCCAGCAGCGCCACCGTCACCGCCGGGTTCAGGTGAGGACGAGCTCGGCCAGCACGGCGCGGACGC
ACCCGGCGTCGACGACCTCGCCGTGGTCGCACGGATCCACCTCCTTCGCCATGGCCCGGAATCGATCCCAAAGCTCTCGCCTTTCCTCAATGGAGAAGAT
CCGCAAGATCAAAAAATAAAAAGAAAAGAATTGCAGAGAGATTTGCTTCGTGAATATCCGAGGGGATGAAAAGGGCAGCAAAAAGTGCGGTGATATTATT
TTTCTTTTCTTTTCGCCAAGGTGGGGTTCTCTCCTCTGCTCTGCC