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Detailed information on CNT30370229


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30596024Oryza glumipatulaOryza meridionalis10087.3697.87235forward

Expression of CNT30370229

Peptides detected in this lncRNA

>peptide 1 (49 aa)
MSFLHTLSSLVCTREEFPGRSPIPNCSRPSTLNPGVFWRLASGEEVATC*

>peptide 2 (76 aa)
CNVPPSPGRARLHLIAFIGHRLPSQTNACLFCTLCPHSCAPGKNFPVGHPSQIAPGQARLTLEFFGDWLPEKKLQLV

Sequence

>CNT30370229
TGTGTAACGTCCCGCCTTCCCCAGGCCGGGCCCGCTTACATCTGATAGCTTTCATAGGTCATAGACTGCCCTCACAGACCAACGCATGTCTTTTCTGCAC
ACTTTGTCCTCACTCGTGTGCACCCGGGAAGAATTTCCCGGTCGGTCACCCATCCCAAATTGCTCCAGGCCAAGCACGCTTAACCCTGGAGTTTTTTGGA
GATTGGCTTCCGGAGAAGAAGTTGCAACTTGTTGA