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Detailed information on CNT30370179


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693017Oryza glumipatulaOryza sativa32.758.47100113reverse complement
CNT30180217Oryza glumipatulaSecale cereale23.777.486.5982reverse complement
CNT30553530Oryza glumipatulaOryza glaberrima54.4970.9488.83188reverse complement
CNT30596085Oryza glumipatulaOryza meridionalis82.3217.7993.31284reverse complement
CNT30101572Oryza glumipatulaOryza rufipogon73.9116.1599.22255reverse complement

Expression of CNT30370179

Peptides detected in this lncRNA

>peptide 1 (80 aa)
MASKLGMVVLLISGLFAARCAAVVTTGEPVVAGLSWGFYDTSCPSVEGIVRWHVTEALRRDIGIAAGLVRIFFHDCFPQAR

Sequence

>CNT30370179
AGGGCATGGAGGGATGGACCATTTGCAGCAGGCAGAGGTCGAGCTGAGAGTGATCGACCTTTGTTAGCTAAGCTTAGGTAGATAGAGGGTAGTGTTGAGC
AATGGCGTCCAAGCTGGGTATGGTTGTGCTACTGATCTCGGGCCTCTTTGCTGCCCGTTGCGCGGCCGTGGTGACCACCGGCGAACCCGTCGTCGCCGGC
CTCTCCTGGGGGTTCTATGACACGTCGTGTCCGTCGGTGGAGGGCATCGTGAGGTGGCACGTCACCGAGGCCCTCCGCCGCGACATCGGCATCGCCGCCG
GACTCGTCCGCATCTTCTTCCACGACTGCTTCCCGCAGGCACGTC