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Detailed information on CNT30370120


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30553355Oryza glumipatulaOryza glaberrima10077.7499.23653forward
CNT30101314Oryza glumipatulaOryza rufipogon10072.5698.93653forward
CNT30576127Oryza glumipatulaOryza barthii10054.9799.23653forward

Expression of CNT30370120

Peptides detected in this lncRNA

>peptide 1 (64 aa)
MMSASVPPGGAPGHGGARGQGFAPCFCMAVVNRQQATDDGGGVEEEIRKEIMLGSLLEGARLGK*

Sequence

>CNT30370120
CTCTCTTCAGCCACACACGCGCCCACCTCGCCGATTTCTCCTCCACGCACGGGATGAACTCATGAAAGAGTGAGTAACCCGAGAAGCTGTCAGTGAGAGA
AAGAAGCCGTCGATGGGGGAGGAGTTGGCGAAGCGGCAGCAGCATCCGCGATGATGTCGGCGTCCGTTCCGCCGGGCGGAGCCCCTGGTCACGGCGGAGC
CCGCGGCCAAGGATTTGCGCCGTGTTTTTGCATGGCAGTGGTGAACCGACAACAAGCCACTGATGATGGAGGGGGAGTGGAAGAGGAGATAAGAAAGGAA
ATAATGCTCGGAAGCCTACTAGAGGGTGCGCGATTGGGCAAATAAGCCTAGACATAGGGGCGTGTGTTTGGGCGAAATGCTTGCAGCTTGCGGGGCAGCA
GGAGGTGATTTTAGAGTTTGCTTCAAAAAATAAAAGTAAGTGATCATAATCTATTTGCTTGGTCATGTAGATAGAATCTTATAAAACTAGTAGATACCCC
GCGCGTTGCTGCGGGCATAGAAGTACAATTATCAATGTGCAACATTAGTGCAAACAATCTAAATAAATTTGCTTATAATTTGCTGAGAATCTCTTAATGA
TAGTTCTGATCCCACTGATGTCTGATAGTATATGAAATCTTCATCTGCTGGCC